Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | SAMN02910411_2563 | Not Available | Positive | 2151274 - 2152107 | 31641.2 |
| alpha-l-rhamnosidase | SAMN02910411_2564 | Not Available | Positive | 2152097 - 2154331 | 84385.2 |
| arac-type dna-binding protein | SAMN02910411_2565 | Not Available | Negative | 2154348 - 2155313 | 37382.8 |
| l-arabinose isomerase | SAMN02910411_2566 | Not Available | Positive | 2155423 - 2156844 | 51915.3 |
| rhamnulose-1-phosphate aldolase | SAMN02910411_2567 | Not Available | Positive | 2156858 - 2157703 | 31750.0 |
| rhamnulokinase | SAMN02910411_2568 | Not Available | Positive | 2157703 - 2159076 | 50573.7 |
| transcriptional regulator, tetr family | SAMN02910411_2569 | Not Available | Positive | 2159116 - 2159688 | 22554.7 |
| lactaldehyde reductase | SAMN02910411_2570 | Not Available | Positive | 2159846 - 2160994 | 41143.4 |
| pyruvate kinase | SAMN02910411_2571 | Not Available | Positive | 2161182 - 2162597 | 51515.2 |
| l,d-transpeptidase catalytic domain | SAMN02910411_2572 | Not Available | Positive | 2162876 - 2163736 | 31627.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
