Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transport system atp-binding protein | SAMN02910411_2523 | Not Available | Negative | 2096762 - 2097847 | 40343.1 |
| oligopeptide transport system permease protein | SAMN02910411_2524 | Not Available | Negative | 2097857 - 2098870 | 37695.6 |
| oligopeptide transport system permease protein | SAMN02910411_2525 | Not Available | Negative | 2098872 - 2099807 | 34170.0 |
| oligopeptide transport system substrate-binding protein | SAMN02910411_2526 | Not Available | Negative | 2099890 - 2101539 | 60213.5 |
| hypothetical protein | SAMN02910411_2527 | Not Available | Positive | 2101886 - 2102626 | 28735.4 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN02910411_2528 | Not Available | Positive | 2102730 - 2105309 | 96300.6 |
| acetyl esterase/lipase | SAMN02910411_2529 | Not Available | Positive | 2105331 - 2106227 | 34187.8 |
| laci family transcriptional regulator | SAMN02910411_2530 | Not Available | Negative | 2106238 - 2107293 | 39243.0 |
| beta-fructofuranosidase | SAMN02910411_2531 | Not Available | Positive | 2107523 - 2109019 | 56456.5 |
| hypothetical protein | SAMN02910411_2532 | Not Available | Positive | 2109030 - 2113538 | 166448.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
