Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulose-5-phosphate 4-epimerase | SAMN02910411_2513 | Not Available | Positive | 2084350 - 2085045 | 25832.4 |
| arac-type dna-binding protein | SAMN02910411_2514 | Not Available | Negative | 2085112 - 2086071 | 36774.5 |
| raffinose/stachyose/melibiose transport system substrate-binding protein | SAMN02910411_2515 | Not Available | Positive | 2086364 - 2087761 | 51346.5 |
| raffinose/stachyose/melibiose transport system permease protein | SAMN02910411_2516 | Not Available | Positive | 2087851 - 2088762 | 33851.3 |
| raffinose/stachyose/melibiose transport system permease protein | SAMN02910411_2517 | Not Available | Positive | 2088765 - 2089604 | 31257.7 |
| right handed beta helix region | SAMN02910411_2518 | Not Available | Positive | 2089617 - 2091611 | 75431.3 |
| dna-binding transcriptional regulator, frmr family | SAMN02910411_2519 | Not Available | Positive | 2091750 - 2092079 | 12339.9 |
| cu2+-exporting atpase | SAMN02910411_2520 | Not Available | Positive | 2092092 - 2094656 | 89942.0 |
| molecular chaperone ibpa, hsp20 family | SAMN02910411_2521 | Not Available | Positive | 2095358 - 2095798 | 16651.3 |
| oligopeptide transport system atp-binding protein | SAMN02910411_2522 | Not Available | Negative | 2095843 - 2096778 | 34643.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
