Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydrogenase | SAMN02910411_0781 | Not Available | Positive | 182620 - 183720 | 40524.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN02910411_0782 | Not Available | Positive | 183720 - 184994 | 44421.8 |
| zinc transporter, zip family | SAMN02910411_0783 | Not Available | Negative | 185020 - 185799 | 27316.4 |
| methyl-accepting chemotaxis protein | SAMN02910411_0784 | Not Available | Negative | 185891 - 187549 | 59371.1 |
| sec-c motif-containing protein | SAMN02910411_0785 | Not Available | Negative | 187740 - 188249 | 19761.7 |
| sh3 domain-containing protein | SAMN02910411_0786 | Not Available | Negative | 188358 - 189431 | 38325.6 |
| riboflavin kinase / fmn adenylyltransferase | SAMN02910411_0787 | Not Available | Negative | 189524 - 190441 | 34532.6 |
| trna pseudouridine55 synthase | SAMN02910411_0788 | Not Available | Negative | 190445 - 191359 | 33719.0 |
| phosphoesterase recj domain-containing protein | SAMN02910411_0789 | Not Available | Negative | 191360 - 192337 | 35825.6 |
| ribosome-binding factor a | SAMN02910411_0790 | Not Available | Negative | 192363 - 192749 | 14392.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
