Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| act domain-containing protein | SAMN02910411_2503 | Not Available | Positive | 2073172 - 2073447 | 10137.4 |
| hypothetical protein | SAMN02910411_2504 | Not Available | Positive | 2073456 - 2074820 | 47894.3 |
| glycosyl hydrolases family 43 | SAMN02910411_2505 | Not Available | Negative | 2074868 - 2075842 | 37184.2 |
| raffinose/stachyose/melibiose transport system permease protein | SAMN02910411_2506 | Not Available | Negative | 2075853 - 2076680 | 30379.6 |
| raffinose/stachyose/melibiose transport system permease protein | SAMN02910411_2507 | Not Available | Negative | 2076696 - 2077580 | 33345.1 |
| raffinose/stachyose/melibiose transport system substrate-binding protein | SAMN02910411_2508 | Not Available | Negative | 2077686 - 2078969 | 46174.4 |
| arac-type dna-binding protein | SAMN02910411_2509 | Not Available | Positive | 2079298 - 2080200 | 35033.0 |
| l-arabinose isomerase | SAMN02910411_2510 | Not Available | Positive | 2080336 - 2081835 | 56536.7 |
| transaldolase | SAMN02910411_2511 | Not Available | Positive | 2081955 - 2082611 | 23283.3 |
| sugar (pentulose or hexulose) kinase | SAMN02910411_2512 | Not Available | Positive | 2082755 - 2084350 | 57836.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
