Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| condensin subunit scpa | SAMN02910411_0771 | Not Available | Negative | 170035 - 170790 | 29414.6 |
| isocitrate dehydrogenase (nadp) | SAMN02910411_0772 | Not Available | Negative | 171009 - 172214 | 45325.0 |
| leucyl-trna synthetase | SAMN02910411_0773 | Not Available | Negative | 172286 - 174691 | 90584.4 |
| transcriptional regulator, contains xre-family hth domain | SAMN02910411_0774 | Not Available | Negative | 174780 - 175979 | 46209.7 |
| extracellular protein | SAMN02910411_0775 | Not Available | Negative | 176090 - 176905 | 31278.6 |
| hypothetical protein | SAMN02910411_0776 | Not Available | Negative | 176892 - 178124 | 46905.4 |
| protein of unknown function | SAMN02910411_0777 | Not Available | Negative | 178146 - 178865 | 27282.2 |
| pp_00178 | SAMN02910411_0778 | Not Available | Positive | 178986 - 179954 | Not Available |
| hypothetical protein | SAMN02910411_0779 | Not Available | Negative | 179948 - 180214 | 10079.5 |
| elongation factor g | SAMN02910411_0780 | Not Available | Negative | 180351 - 182447 | 77403.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
