Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | SAMN02910411_2257 | Not Available | Positive | 1834183 - 1835088 | 34358.5 |
| alpha-n-arabinofuranosidase | SAMN02910411_2258 | Not Available | Negative | 1835169 - 1836689 | 57362.9 |
| arabinosaccharide transport system permease protein | SAMN02910411_2259 | Not Available | Negative | 1836714 - 1837583 | 31978.5 |
| arabinosaccharide transport system permease protein | SAMN02910411_2260 | Not Available | Negative | 1837585 - 1838481 | 33612.0 |
| arabinosaccharide transport system substrate-binding protein | SAMN02910411_2261 | Not Available | Negative | 1838559 - 1839980 | 52266.4 |
| predicted transcriptional regulator | SAMN02910411_2262 | Not Available | Positive | 1840380 - 1841300 | 33719.9 |
| hypothetical protein | SAMN02910411_2263 | Not Available | Negative | 1841305 - 1841553 | 9449.57 |
| beta-xylosidase, gh43 family | SAMN02910411_2264 | Not Available | Negative | 1841546 - 1842493 | 36630.7 |
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN02910411_2265 | Not Available | Negative | 1842518 - 1844047 | 56433.1 |
| pp_01620 | SAMN02910411_2266 | Not Available | Negative | 1844202 - 1844882 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
