Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mrna interferase hica | SAMN02910411_1964 | Not Available | Negative | 1467033 - 1467203 | 6392.85 |
| hypothetical protein | SAMN02910411_1965 | Not Available | Negative | 1467594 - 1467992 | 15000.0 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN02910411_1966 | Not Available | Negative | 1468005 - 1468646 | 23682.1 |
| helix-turn-helix | SAMN02910411_1967 | Not Available | Negative | 1468903 - 1469247 | 12937.5 |
| pin domain nuclease, a component of toxin-antitoxin system (pin domain) | SAMN02910411_1968 | Not Available | Negative | 1469260 - 1469637 | 14413.6 |
| protein of unknown function | SAMN02910411_1969 | Not Available | Negative | 1469637 - 1469837 | 7863.31 |
| choloylglycine hydrolase | SAMN02910411_1970 | Not Available | Negative | 1470089 - 1471063 | 36875.2 |
| hypothetical protein | SAMN02910411_1971 | Not Available | Negative | 1471076 - 1471567 | 18674.5 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN02910411_1972 | Not Available | Negative | 1471608 - 1472285 | 25602.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN02910411_1973 | Not Available | Negative | 1472298 - 1473062 | 29460.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
