Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN02910411_1944 | Not Available | Negative | 1445576 - 1446619 | 39950.3 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN02910411_1945 | Not Available | Negative | 1446635 - 1448587 | 73146.9 |
| hypothetical protein | SAMN02910411_1946 | Not Available | Negative | 1448688 - 1449440 | 27534.1 |
| hypothetical protein | SAMN02910411_1947 | Not Available | Negative | 1449524 - 1450345 | 30890.2 |
| hypothetical protein | SAMN02910411_1948 | Not Available | Negative | 1450348 - 1452372 | 76458.9 |
| arabinogalactan oligomer / maltooligosaccharide transport system permease protein | SAMN02910411_1949 | Not Available | Negative | 1452476 - 1453318 | 31344.5 |
| carbohydrate abc transporter membrane protein 1, cut1 family (tc 3.a.1.1.-) | SAMN02910411_1950 | Not Available | Negative | 1453318 - 1454730 | 53066.0 |
| arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein | SAMN02910411_1951 | Not Available | Negative | 1454794 - 1456086 | 46040.2 |
| transcriptional regulator, laci family | SAMN02910411_1952 | Not Available | Negative | 1456248 - 1457237 | 36208.7 |
| cation:h+ antiporter | SAMN02910411_1953 | Not Available | Negative | 1457397 - 1458335 | 32611.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
