Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910411_1914 | Not Available | Negative | 1408478 - 1410469 | 74875.6 |
| thymidine kinase | SAMN02910411_1915 | Not Available | Negative | 1410469 - 1411050 | 21897.3 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910411_1916 | Not Available | Negative | 1411139 - 1412746 | 61992.0 |
| vanw like protein | SAMN02910411_1917 | Not Available | Negative | 1412897 - 1413751 | 30664.1 |
| hypothetical protein | SAMN02910411_1918 | Not Available | Negative | 1413867 - 1414349 | 17753.3 |
| hypothetical protein | SAMN02910411_1919 | Not Available | Positive | 1414718 - 1415224 | 18887.3 |
| starch phosphorylase | SAMN02910411_1920 | Not Available | Negative | 1415110 - 1417359 | 85411.5 |
| arac-type dna-binding protein | SAMN02910411_1921 | Not Available | Positive | 1417483 - 1418352 | 33518.9 |
| zinc-ribbon domain-containing protein | SAMN02910411_1922 | Not Available | Negative | 1418388 - 1420598 | 81010.5 |
| abc-2 type transport system permease protein | SAMN02910411_1923 | Not Available | Negative | 1420614 - 1421681 | 40475.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
