Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN02910411_1883 | Not Available | Negative | 1382587 - 1383483 | 34190.1 |
| methyltransferase domain-containing protein | SAMN02910411_1884 | Not Available | Negative | 1383499 - 1384263 | 29244.4 |
| methyltransferase domain-containing protein | SAMN02910411_1885 | Not Available | Negative | 1384263 - 1385126 | 32877.1 |
| peptide/nickel transport system atp-binding protein | SAMN02910411_1886 | Not Available | Negative | 1385136 - 1385813 | 24979.4 |
| peptide/nickel transport system atp-binding protein | SAMN02910411_1887 | Not Available | Negative | 1385792 - 1386598 | 29520.7 |
| peptide/nickel transport system substrate-binding protein | SAMN02910411_1888 | Not Available | Negative | 1386618 - 1388177 | 56519.7 |
| peptide/nickel transport system permease protein | SAMN02910411_1889 | Not Available | Negative | 1388237 - 1389061 | 29397.8 |
| peptide/nickel transport system permease protein | SAMN02910411_1890 | Not Available | Negative | 1389058 - 1389999 | 34916.9 |
| hypothetical protein | SAMN02910411_1891 | Not Available | Negative | 1390129 - 1390629 | 19368.4 |
| peptide-methionine (s)-s-oxide reductase | SAMN02910411_1892 | Not Available | Negative | 1390632 - 1391117 | 18533.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
