Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation protein hypf | SAMN02910411_1833 | Not Available | Negative | 1321367 - 1323700 | 85743.8 |
| 4fe-4s dicluster domain-containing protein | SAMN02910411_1834 | Not Available | Negative | 1324138 - 1324551 | 15091.2 |
| ech hydrogenase subunit e | SAMN02910411_1835 | Not Available | Negative | 1324657 - 1325736 | 40587.2 |
| ech hydrogenase subunit d | SAMN02910411_1836 | Not Available | Negative | 1325738 - 1326100 | 14439.2 |
| ech hydrogenase subunit c | SAMN02910411_1837 | Not Available | Negative | 1326113 - 1326556 | 15718.0 |
| ech hydrogenase subunit b | SAMN02910411_1838 | Not Available | Negative | 1326581 - 1327456 | 32619.8 |
| ech hydrogenase subunit a | SAMN02910411_1839 | Not Available | Negative | 1327456 - 1329393 | 71275.5 |
| [fefe] hydrogenase, group b1/b3 | SAMN02910411_1840 | Not Available | Negative | 1329569 - 1331047 | 53981.2 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | SAMN02910411_1841 | Not Available | Negative | 1331077 - 1332264 | 43896.1 |
| 2-iminoacetate synthase | SAMN02910411_1842 | Not Available | Negative | 1332343 - 1333785 | 54612.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
