Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/melibiose symporter | SAMN02910411_1802 | Not Available | Negative | 1289239 - 1290570 | 48608.2 |
| sseb protein n-terminal domain-containing protein | SAMN02910411_1803 | Not Available | Negative | 1290616 - 1291905 | 48244.7 |
| zinc-ribbon domain-containing protein | SAMN02910411_1804 | Not Available | Negative | 1292018 - 1293517 | 55402.2 |
| large conductance mechanosensitive channel | SAMN02910411_1805 | Not Available | Positive | 1293752 - 1294198 | 15976.6 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910411_1806 | Not Available | Negative | 1294224 - 1295951 | 66437.0 |
| holin-like protein | SAMN02910411_1807 | Not Available | Positive | 1296155 - 1296514 | 12985.0 |
| tigr00659 family protein | SAMN02910411_1808 | Not Available | Positive | 1296514 - 1297206 | 24319.4 |
| hypothetical protein | SAMN02910411_1809 | Not Available | Negative | 1297248 - 1298189 | 35357.2 |
| hypothetical protein | SAMN02910411_1811 | Not Available | Negative | 1298450 - 1298980 | 19683.2 |
| transcriptional regulator, contains xre-family hth domain | SAMN02910411_1812 | Not Available | Negative | 1299038 - 1299385 | 12863.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
