Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | SAMN02910411_1792 | Not Available | Positive | 1278552 - 1280372 | 66653.7 |
| putative efflux protein, mate family | SAMN02910411_1793 | Not Available | Negative | 1280320 - 1281660 | 48510.3 |
| dnaj domain-containing protein | SAMN02910411_1794 | Not Available | Negative | 1281638 - 1282108 | 17546.7 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN02910411_1795 | Not Available | Negative | 1282113 - 1283318 | 44001.2 |
| edd domain protein, degv family | SAMN02910411_1796 | Not Available | Negative | 1283324 - 1284160 | 30546.6 |
| transglutaminase-like superfamily protein | SAMN02910411_1797 | Not Available | Negative | 1284260 - 1285465 | 46320.9 |
| cold shock protein (beta-ribbon, cspa family) | SAMN02910411_1798 | Not Available | Negative | 1285604 - 1285807 | 7218.32 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN02910411_1799 | Not Available | Negative | 1285979 - 1287481 | 55364.8 |
| lysophospholipase | SAMN02910411_1800 | Not Available | Negative | 1287491 - 1288462 | 37906.6 |
| glycerophosphoryl diester phosphodiesterase | SAMN02910411_1801 | Not Available | Negative | 1288464 - 1289285 | 31425.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
