Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase family protein | SAMN02910411_1721 | Not Available | Positive | 1210612 - 1211169 | 20542.3 |
| superoxide reductase | SAMN02910411_1722 | Not Available | Negative | 1211219 - 1211587 | 13205.0 |
| dna-binding transcriptional regulator, arsr family | SAMN02910411_1723 | Not Available | Negative | 1211736 - 1212719 | 38062.9 |
| abc-2 type transport system permease protein | SAMN02910411_1724 | Not Available | Negative | 1212731 - 1213540 | 30381.9 |
| abc-2 type transport system atp-binding protein | SAMN02910411_1725 | Not Available | Negative | 1213537 - 1214526 | 37518.6 |
| abc-2 type transport system permease protein | SAMN02910411_1726 | Not Available | Negative | 1214535 - 1215347 | 30407.3 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910411_1727 | Not Available | Positive | 1215585 - 1216619 | 39599.4 |
| 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis | SAMN02910411_1728 | Not Available | Negative | 1216681 - 1217274 | 21871.2 |
| acetyltransferase (gnat) domain-containing protein | SAMN02910411_1729 | Not Available | Negative | 1217335 - 1217739 | 15693.7 |
| ribosomal protein s18 acetylase rimi | SAMN02910411_1730 | Not Available | Negative | 1217750 - 1218205 | 17327.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
