Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-ribbon domain-containing protein | SAMN02910411_1711 | Not Available | Negative | 1201578 - 1202198 | 21916.4 |
| virus viroplasmin | SAMN02910411_1712 | Not Available | Negative | 1202325 - 1203299 | 35867.6 |
| arac-type dna-binding protein | SAMN02910411_1713 | Not Available | Negative | 1203302 - 1204132 | 32474.4 |
| protein n-acetyltransferase, rimj/riml family | SAMN02910411_1714 | Not Available | Negative | 1204132 - 1204890 | 29535.8 |
| ig-like domain (group 2) | SAMN02910411_1715 | Not Available | Negative | 1204901 - 1206175 | 46668.7 |
| hypothetical protein | SAMN02910411_1716 | Not Available | Positive | 1206366 - 1207070 | 27087.3 |
| shikimate kinase | SAMN02910411_1717 | Not Available | Negative | 1207067 - 1207570 | 18180.1 |
| protein of unknown function | SAMN02910411_1718 | Not Available | Negative | 1207605 - 1209047 | 49705.9 |
| uncharacterized membrane protein yhid, involved in acid resistance | SAMN02910411_1719 | Not Available | Negative | 1209060 - 1209731 | 24374.2 |
| vtc domain-containing protein | SAMN02910411_1720 | Not Available | Negative | 1209752 - 1210429 | 26188.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
