Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase | SAMN02910411_1651 | Not Available | Positive | 1119611 - 1120213 | 22732.3 |
| helix-turn-helix domain-containing protein | SAMN02910411_1652 | Not Available | Negative | 1120335 - 1121090 | 26981.7 |
| acetyl esterase/lipase | SAMN02910411_1653 | Not Available | Negative | 1121206 - 1122207 | 38043.9 |
| nadph-dependent glutamate synthase beta chain | SAMN02910411_1654 | Not Available | Negative | 1122266 - 1125049 | 102759.0 |
| hydrogenase nickel incorporation protein hypb | SAMN02910411_1655 | Not Available | Negative | 1125123 - 1125794 | 24662.4 |
| transglutaminase-like superfamily protein | SAMN02910411_1656 | Not Available | Positive | 1126072 - 1126884 | 30442.7 |
| sortase a | SAMN02910411_1657 | Not Available | Negative | 1127206 - 1127793 | 21603.7 |
| collagen binding domain-containing protein | SAMN02910411_1658 | Not Available | Negative | 1127783 - 1132753 | 180319.0 |
| signal transduction histidine kinase | SAMN02910411_1659 | Not Available | Negative | 1132938 - 1135295 | 87577.3 |
| glycine hydroxymethyltransferase | SAMN02910411_1660 | Not Available | Negative | 1135333 - 1136583 | 45395.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
