Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio ruminis |
| Strain | DSM 9787 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905383 bp
Thymine Count
941599 bp
Guanine Count
563383 bp
Cytosine Count
610013 bp
Genome Length
3020378 bp
Protein-coding Genes
2726 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix | SAMN02910411_1620 | Not Available | Negative | 1088339 - 1088683 | 12794.6 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910411_1621 | Not Available | Negative | 1088762 - 1089901 | 43800.6 |
| predicted dehydrogenase | SAMN02910411_1622 | Not Available | Negative | 1089996 - 1090952 | 35654.5 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN02910411_1623 | Not Available | Negative | 1090969 - 1092012 | 39305.0 |
| putative hydrolase of the had superfamily | SAMN02910411_1624 | Not Available | Positive | 1092171 - 1092776 | 23310.8 |
| uncharacterized protein, upf0371 family | SAMN02910411_1625 | Not Available | Negative | 1092810 - 1094294 | 54549.9 |
| protein of unknown function | SAMN02910411_1626 | Not Available | Positive | 1094506 - 1095147 | 23298.6 |
| alanine or glycine:cation symporter, agcs family | SAMN02910411_1627 | Not Available | Negative | 1095199 - 1096737 | 55017.0 |
| putative efflux protein, mate family | SAMN02910411_1628 | Not Available | Positive | 1096943 - 1098304 | 49697.9 |
| galactose mutarotase | SAMN02910411_1629 | Not Available | Negative | 1098301 - 1099176 | 33430.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
