Xanthobacter autotrophicus strain DSM 432

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Xanthobacteraceae

Genus

Xanthobacter

Description

Xanthobacter autotrophicus strain DSM 432 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and is classified as an aerobic heterotroph. This strain is versatile in its energy acquisition, utilizing organic compounds in its environment to sustain its metabolic processes. Its classification as an aerobe indicates that it requires oxygen for optimal growth, aligning with its heterotrophic lifestyle which relies on the assimilation of carbon from organic sources. The habitat of X. autotrophicus strain DSM 432 is diverse, suggesting a remarkable adaptability to various ecological niches. This adaptability may facilitate its utilization of a range of organic substrates, thereby playing a potential role in biogeochemical cycles within its environments. Overall, the unique combination of traits exhibited by Xanthobacter autotrophicus strain DSM 432 highlights its functional versatility and ecological significance, particularly in organic matter decomposition and nutrient cycling in aerobic environments. This strain exemplifies the complex interactions between microbial life and its environment, reflecting the importance of heterotrophic bacteria in maintaining ecosystem health and balance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyXanthobacteraceae
GenusXanthobacter
SpeciesXanthobacter autotrophicus
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Xanthobacter autotrophicus strain DSM 432
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Xanthobacter autotrophicus strain DSM 432

Accession NumberNZ_VAUP01000009

Gene Summary

Adenine Count

19613 bp

Thymine Count

18373 bp

Guanine Count

36896 bp

Cytosine Count

39156 bp

Genome Length

114038 bp

Protein-coding Genes

100353 genes

Non-Coding Genes

13685 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+361041 - 361064Not Available
Putative minor tail proteinFBQ73_01730Not Available-364900 - 36525613214.7
Tail tape measure proteinFBQ73_01735Not Available-365256 - 36725369868.8
Terminase large subunitFBQ73_01740Not Available-367261 - 36887460401.6
Gp1FBQ73_01745Not Available-368852 - 36922313486.3
head-tail adaptor proteinFBQ73_01750Not Available-369220 - 36955212031.4
duf3168 domain-containing proteinFBQ73_01755Not Available-369549 - 36997715452.4
Head/tail componentFBQ73_01760Not Available-369974 - 37036614767.9
Head-tail connector family proteinFBQ73_01765Not Available-370368 - 37078415267.5
Putative endonucleaseFBQ73_01770Not Available-370794 - 37182838734.2

Displaying genes 1 – 10 of 4447 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

95 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003983di-trans,octa-cis-undecaprenyl phosphateC55H89O4PChemical structure of di-trans,octa-cis-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm0004072alpha-D-glucosyl di-trans,octa-cis-undecaprenyl diphosphateC61H100O12P2Chemical structure of alpha-D-glucosyl di-trans,octa-cis-undecaprenyl diphosphateNot available
Average1087.408Da
Monoisotopic1086.6701Da
BASm0004386N-acetyl-alpha-D-glucosaminyl-di-trans,octa-cis-undecaprenyl diphosphateC63H103NO12P2Chemical structure of N-acetyl-alpha-D-glucosaminyl-di-trans,octa-cis-undecaprenyl diphosphateNot available
Average1128.461Da
Monoisotopic1127.696649Da
BASm00051404-(beta-D-ribofuranosyl)aminobenzene 5'-phosphateC11H14NO7PChemical structure of 4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphateNot available
Average303.208Da
Monoisotopic303.051885953Da

Displaying 1–10 of 95 metabolites