Xanthobacter autotrophicus strain DSM 432

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Xanthobacteraceae

Genus

Xanthobacter

Description

Xanthobacter autotrophicus strain DSM 432 is a Gram-negative, rod-shaped bacterium characterized by its ability to thrive as a heterotroph in various habitats. This organism is classified as an aerobe, requiring oxygen for its metabolic processes. It demonstrates mobility due to the presence of flagella, enabling it to navigate its environment effectively. In terms of cellular structure, Xanthobacter autotrophicus strain DSM 432 possesses two membranes and has a unique genetic configuration with two replicons. This structural complexity is indicative of its adaptability and potential resilience in diverse ecological settings. As a free-living bacterium, Xanthobacter autotrophicus strain DSM 432 plays a significant role in its ecosystem, contributing to nutrient cycling and potentially influencing the dynamics of microbial communities. Its mesophilic temperature range suggests that it is well-adapted to moderate temperature environments, which are common in many natural settings. The combination of its mobility, aerobic metabolism, and free-living nature allows Xanthobacter autotrophicus strain DSM 432 to occupy a versatile ecological niche, making it an important organism for studying microbial interactions, nutrient cycling, and the role of heterotrophs in various ecosystems. The accession numbers NZ_VAUP01000009 and VAUP00000000.1 provide a pathway for further investigation into its genetic and functional characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyXanthobacteraceae
GenusXanthobacter
SpeciesXanthobacter autotrophicus
Strainstrain DSM 432

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Xanthobacter autotrophicus strain DSM 432
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Xanthobacter autotrophicus strain DSM 432 NODE_9, whole genome

Gene Summary

Adenine Count

814344 bp

Thymine Count

812357 bp

Guanine Count

1687515 bp

Cytosine Count

1698981 bp

Genome Length

5013287 bp

Protein-coding Genes

4347 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome bd-i ubiquinol oxidase subunit cydaFBQ73_00285Not AvailablePositive57789 - 5936657799.7
cytochrome d ubiquinol oxidase subunit iiFBQ73_00290Not AvailablePositive59371 - 6052841401.3
cytochrome bd-i oxidase subunit cydxFBQ73_00295Not AvailablePositive60546 - 606895337.56
hypothetical proteinFBQ73_00300Not AvailablePositive60882 - 6131015829.3
hamp domain-containing histidine kinaseFBQ73_00305Not AvailablePositive61704 - 6303547484.6
response regulator transcription factorFBQ73_00310Not AvailablePositive63025 - 6355819586.7
abc transporter atp-binding proteinFBQ73_00315Not AvailableNegative63722 - 6444425611.4
atp-binding cassette domain-containing proteinFBQ73_00320Not AvailableNegative64454 - 6644571018.4
branched-chain amino acid abc transporter permeaseFBQ73_00325Not AvailableNegative66450 - 6734931114.2
amino acid abc transporter substrate-binding proteinFBQ73_00330Not AvailableNegative67519 - 6873342451.2

Displaying genes 121 – 130 of 4447 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.