Desulfovibrio piger strain FI11049

Spiral

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Desulfovibrio

Description

Desulfovibrio piger strain FI11049 is a Gram-negative, spiral-shaped bacterium characterized by the presence of true flagella, which facilitate its motility. This strain is notably found in various human habitats, including blood, feces, and the intestine. It is associated with Homo sapiens, indicating its relevance in the human microbiome and possibly its involvement in human health or disease. The strain is documented under the accession number NZ_LT630450.1, which serves as a reference for its genetic and genomic characteristics. Notably, Desulfovibrio piger strain FI11049 contains a single replicon, suggesting a streamlined genetic architecture, which can be advantageous for its survival and adaptability in diverse environments. The presence of Desulfovibrio in the human intestine is of particular biological and ecological interest. Members of the Desulfovibrio genus are known to participate in sulfate reduction, a process that can influence the sulfur cycle within the gut microbiome. This metabolic capability may have implications for gut health, including the modulation of inflammatory responses and the maintenance of microbial diversity. Understanding the role of Desulfovibrio piger strain FI11049 in the human microbiome could provide insights into its potential impacts on human health and its interactions within complex microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusDesulfovibrio
SpeciesDesulfovibrio piger
Strainstrain FI11049

Profile

Physiology
Gram staining propertiesNegative
ShapeSpiral
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Desulfovibrio piger strain FI11049
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatblood; feces; intestine
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfovibrio piger strain FI11049 isolate FI11049 chromosome I,

Gene Summary

Adenine Count

504289 bp

Thymine Count

501372 bp

Guanine Count

905619 bp

Cytosine Count

896251 bp

Genome Length

2807531 bp

Protein-coding Genes

2302 genes

Non-Coding Genes

230 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein adenylyltransferase ficDESPIGER_RS10000Not AvailablePositive2222577 - 222311920613.9
zinc ribbon domain-containing proteinDESPIGER_RS13190Not AvailablePositive2224279 - 222506428838.2
Trna-serNot AvailableNot AvailablePositive2225612 - 2225706Not Available
glutamine--trna ligase/yqey domain fusion proteinDESPIGER_RS10015Not AvailablePositive2225898 - 222762265920.6
Trna-lysNot AvailableNot AvailablePositive2227790 - 2227865Not Available
sulfite exporter taue/safe family proteinDESPIGER_RS10025Not AvailablePositive2228276 - 222901025549.6
trab/gumn family proteinDESPIGER_RS10030Not AvailablePositive2229479 - 223125767813.7
hypothetical proteinDESPIGER_RS10035Not AvailablePositive2231336 - 223234036432.5
radical sam/spasm domain-containing proteinDESPIGER_RS10040Not AvailablePositive2232337 - 223340739527.4
autotransporter outer membrane beta-barrel domain-containing proteinDESPIGER_RS12670Not AvailableNegative2233510 - 2236551103492.0

Displaying genes 2021 – 2030 of 2532 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

57 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da
BASm0017409PA(16:0/18:1(9Z))C37H71O8PChemical structure of PA(16:0/18:1(9Z))NULL
Average674.941Da
Monoisotopic674.488656244Da
BASm0017415PA(18:1(9Z)/18:1(9Z))C39H73O8PChemical structure of PA(18:1(9Z)/18:1(9Z))14268-17-8
Average700.979Da
Monoisotopic700.504306309Da
BASm0017417PE(14:0/16:0)C35H70NO8PChemical structure of PE(14:0/16:0)NULL
Average663.918Da
Monoisotopic663.483905216Da

Displaying 1–10 of 57 metabolites

Health Effects

No health effects information available for this bacterium.