Desulfovibrio piger strain FI11049

Spiral

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Desulfovibrio

Description

Desulfovibrio piger strain FI11049 is a Gram-negative, spiral-shaped bacterium primarily found in the blood, feces, and intestines of various hosts. This strain is part of a group of sulfate-reducing bacteria that are known for their ability to metabolize sulfate, which can lead to the production of hydrogen sulfide as a byproduct. The presence of D. piger in these diverse habitats suggests its role in various biochemical cycles, particularly in anaerobic environments where sulfate is available. The spiral morphology of D. piger may facilitate its motility and colonization within the intestinal tract, contributing to its survival in the competitive microbial community of the gut. The strain’s adaptation to both the intestinal milieu and the bloodstream indicates its potential involvement in complex interactions with the host microbiota, as well as its resilience in fluctuating environmental conditions. Understanding the functional role of Desulfovibrio piger strain FI11049 in these specific habitats may provide insights into its contributions to gastrointestinal health and disease. Its presence in fecal matter also highlights the potential of this strain as a marker for assessing gut microbial diversity and health in various hosts. Further investigation into its metabolic pathways could elucidate its ecological significance, particularly in anaerobic digestion and nutrient cycling processes within the intestines.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusDesulfovibrio
SpeciesDesulfovibrio piger
Strainstrain FI11049

Profile

Physiology
Gram staining propertiesNegative
ShapeSpiral
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatblood; feces; intestine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfovibrio piger strain FI11049


Gene Summary

Adenine Count

504289 bp

Thymine Count

501372 bp

Guanine Count

905619 bp

Cytosine Count

896251 bp

Genome Length

2807531 bp

Protein-coding Genes

2302 genes

Non-Coding Genes

230 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Repressor protein ciDESPIGER_RS00100Not Available-24556 - 2506519288.8
hypothetical proteinDESPIGER_RS00105Not Available+25308 - 2573315241.6
helix-turn-helix domain-containing proteinDESPIGER_RS00110Not Available+25730 - 259729069.03
Transposase aDESPIGER_RS00115Not Available+25995 - 2816382016.0
Dna transposition proteinDESPIGER_RS00120Not Available+28173 - 2888626358.9
hypothetical proteinDESPIGER_RS00125Not Available+28897 - 2955024763.3
hypothetical proteinDESPIGER_RS00130Not Available+29544 - 298259825.69
Host-nuclease inhibitor protein gam2c putativeDESPIGER_RS00135Not Available+29825 - 3033418953.9
hypothetical proteinDESPIGER_RS00140Not Available+30345 - 305879284.15
Hypothetical proteinDESPIGER_RS00145Not Available+30601 - 3089710350.7

Displaying genes 1 – 10 of 2532 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

57 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da
BASm0017399CDP-DG(18:0/18:1(9Z))C48H87N3O15P2Chemical structure of CDP-DG(18:0/18:1(9Z))NULL
Average1008.178Da
Monoisotopic1007.561243109Da
BASm0017409PA(16:0/18:1(9Z))C37H71O8PChemical structure of PA(16:0/18:1(9Z))NULL
Average674.941Da
Monoisotopic674.488656244Da
BASm0017415PA(18:1(9Z)/18:1(9Z))C39H73O8PChemical structure of PA(18:1(9Z)/18:1(9Z))14268-17-8
Average700.979Da
Monoisotopic700.504306309Da
BASm0017417PE(14:0/16:0)C35H70NO8PChemical structure of PE(14:0/16:0)NULL
Average663.918Da
Monoisotopic663.483905216Da

Displaying 1–10 of 57 metabolites