Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Aggregatibacter

Description

Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906 is a Gram-negative bacterium that is classified as mesophilic, indicating that it thrives at moderate temperatures. This organism has a rod shape and is characterized by the presence of flagella, although it is noted to be non-motile. It possesses a single replicon and two membranes, typical features of Gram-negative bacteria. The ecological niche of A. aphrophilus is primarily host-associated, indicating a relationship with a host organism, yet it is also described as free-living. This dual nature suggests that it may play roles both in symbiotic relationships with hosts and in the broader environment. A. aphrophilus is facultatively anaerobic, meaning it can survive in both aerobic and anaerobic conditions. This adaptability may contribute to its survival in diverse environments, particularly within host-associated habitats where oxygen levels can fluctuate. The accession number for this strain is NZ_LR134327.1, which allows researchers to access genetic and genomic information for further studies. Understanding the characteristics of A. aphrophilus ATCC 33389 may provide insights into its role in health and disease, particularly in relation to its host interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusAggregatibacter
SpeciesAggregatibacter aphrophilus
StrainATCC 33389 strain NCTC 5906

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906 chromosome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hotdog fold thioesteraseEL144_RS02620Not AvailablePositive498587 - 49900915429.8
ferrochelataseEL144_RS02625Not AvailablePositive499002 - 50006339861.1
thiol peroxidaseEL144_RS02630Not AvailablePositive500103 - 50060317806.3
n-acetylglucosamine-6-phosphate deacetylaseEL144_RS02635Not AvailableNegative500888 - 50203341165.5
glucosamine-6-phosphate deaminaseEL144_RS02640Not AvailableNegative502088 - 50289130192.9
n-acetylneuraminate lyaseEL144_RS02645Not AvailableNegative503091 - 50396932382.2
murr/rpir family transcriptional regulatorEL144_RS02650Not AvailableNegative503988 - 50485731937.4
n-acetylmannosamine kinaseEL144_RS02655Not AvailableNegative504862 - 50574631310.7
n-acetylmannosamine-6-phosphate 2-epimeraseEL144_RS02660Not AvailableNegative505763 - 50646724899.1
sialic acid trap transporter substrate-binding protein siapEL144_RS02665Not AvailablePositive506722 - 50770836264.3

Displaying genes 551 – 560 of 2245 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.