Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Aggregatibacter

Description

Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906 is a Gram-negative bacterium that is classified as mesophilic, indicating that it thrives at moderate temperatures. This organism has a rod shape and is characterized by the presence of flagella, although it is noted to be non-motile. It possesses a single replicon and two membranes, typical features of Gram-negative bacteria. The ecological niche of A. aphrophilus is primarily host-associated, indicating a relationship with a host organism, yet it is also described as free-living. This dual nature suggests that it may play roles both in symbiotic relationships with hosts and in the broader environment. A. aphrophilus is facultatively anaerobic, meaning it can survive in both aerobic and anaerobic conditions. This adaptability may contribute to its survival in diverse environments, particularly within host-associated habitats where oxygen levels can fluctuate. The accession number for this strain is NZ_LR134327.1, which allows researchers to access genetic and genomic information for further studies. Understanding the characteristics of A. aphrophilus ATCC 33389 may provide insights into its role in health and disease, particularly in relation to its host interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusAggregatibacter
SpeciesAggregatibacter aphrophilus
StrainATCC 33389 strain NCTC 5906

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906 chromosome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ubiquinone biosynthesis accessory factor ubikEL144_RS01340Not AvailablePositive256420 - 2566689461.64
multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase nadrEL144_RS01345Not AvailablePositive256754 - 25802549568.4
metallophosphoesteraseEL144_RS01350Not AvailablePositive258042 - 25872525939.9
aromatic amino acid transporterEL144_RS01355Not AvailablePositive258829 - 26005843813.3
comea family dna-binding proteinEL144_RS01360Not AvailableNegative260211 - 26080721482.6
atp-dependent chaperone clpbEL144_RS01365Not AvailablePositive261053 - 26362395723.0
surface-adhesin e family proteinEL144_RS01370Not AvailableNegative263721 - 26421818673.6
phosphoribosylformylglycinamidine cyclo-ligaseEL144_RS01375Not AvailablePositive264401 - 26544136990.4
phosphoribosylglycinamide formyltransferaseEL144_RS01380Not AvailablePositive265441 - 26607923857.8
cof-type had-iib family hydrolaseEL144_RS01385Not AvailableNegative266120 - 26693530743.2

Displaying genes 341 – 350 of 2245 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.