Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906

Gram-negativeRodNon-motileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Aggregatibacter

Description

Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906 is a Gram-negative bacterium that is classified as mesophilic, indicating that it thrives at moderate temperatures. This organism has a rod shape and is characterized by the presence of flagella, although it is noted to be non-motile. It possesses a single replicon and two membranes, typical features of Gram-negative bacteria. The ecological niche of A. aphrophilus is primarily host-associated, indicating a relationship with a host organism, yet it is also described as free-living. This dual nature suggests that it may play roles both in symbiotic relationships with hosts and in the broader environment. A. aphrophilus is facultatively anaerobic, meaning it can survive in both aerobic and anaerobic conditions. This adaptability may contribute to its survival in diverse environments, particularly within host-associated habitats where oxygen levels can fluctuate. The accession number for this strain is NZ_LR134327.1, which allows researchers to access genetic and genomic information for further studies. Understanding the characteristics of A. aphrophilus ATCC 33389 may provide insights into its role in health and disease, particularly in relation to its host interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusAggregatibacter
SpeciesAggregatibacter aphrophilus
StrainATCC 33389 strain NCTC 5906

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aggregatibacter aphrophilus ATCC 33389 strain NCTC 5906 chromosome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polyprenyl diphosphate synthaseEL144_RS00385Not AvailableNegative67260 - 6797927542.9
1-deoxy-d-xylulose-5-phosphate reductoisomeraseEL144_RS00390Not AvailableNegative68000 - 6920543786.0
ribosome recycling factorEL144_RS00395Not AvailableNegative69322 - 6987920679.9
ump kinaseEL144_RS00400Not AvailableNegative70089 - 7080225657.6
putative transporterEL144_RS00405Not AvailableNegative70961 - 7261959151.8
abc transporter atp-binding protein/permeaseEL144_RS00410Not AvailablePositive72777 - 7456168351.0
2-isopropylmalate synthaseEL144_RS00415Not AvailablePositive75069 - 7661656186.2
3-isopropylmalate dehydrogenaseEL144_RS00420Not AvailablePositive76721 - 7779738614.4
is4 family transposaseEL144_RS00425Not AvailablePositive77888 - 7903644559.3
3-isopropylmalate dehydratase large subunitEL144_RS00430Not AvailablePositive79221 - 8062750757.0

Displaying genes 151 – 160 of 2245 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.