Pseudomonas knackmussii B13

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas knackmussii B13 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions and has an optimal growth temperature of 32.0 °C. This microbe's Gram-negative classification indicates a unique cell wall structure characterized by an outer membrane containing lipopolysaccharides, which may contribute to its resilience in various environments. The rod shape of P. knackmussii B13 is typical of the Pseudomonas genus, which is known for its metabolic versatility. This strain’s aerobic requirement suggests that it relies on oxygen for its energy production, potentially positioning it as a key player in environments where oxygen is available, such as soil or water bodies. The optimal growth temperature of 32.0 °C hints at its adaptability to moderate thermal conditions, which may facilitate its survival in temperate ecosystems. Given the metabolic capabilities characteristic of Pseudomonas species, P. knackmussii B13 may engage in the degradation of various organic compounds, thereby playing a role in bioremediation processes. This trait could be particularly beneficial in environments contaminated with organic pollutants, as its aerobic metabolism might enhance the breakdown of such materials. Overall, the ecological prominence of Pseudomonas knackmussii B13 likely extends to its involvement in nutrient cycling and its potential application in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas knackmussii
StrainB13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas knackmussii B13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas knackmussii B13


Gene Summary

Adenine Count

1063937 bp

Thymine Count

1055439 bp

Guanine Count

2016651 bp

Cytosine Count

2026878 bp

Genome Length

6162905 bp

Protein-coding Genes

5592 genes

Non-Coding Genes

246 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
ExcisionasePKB_RS02785Not Available-614142 - 61446511959.3
Hth-type transcriptional regulator prtrPKB_RS02790Not Available-614598 - 61536827817.1
Conjugative transfer proteinPKB_RS02795Not Available+615770 - 6159797667.13
hypothetical proteinPKB_RS02800Not Available+615998 - 61635713561.6
gnat family n-acetyltransferasePKB_RS02805Not Available+616433 - 61691517908.0
phage holin family proteinPKB_RS02810Not Available+617200 - 61754712023.9
Putative minor tail proteinPKB_RS02815Not Available+617580 - 61811019113.0
Predicted baseplatePKB_RS02820Not Available+618107 - 61867019632.9
Baseplate assembly proteinPKB_RS02825Not Available+618774 - 61910012096.9
Baseplate assembly proteinPKB_RS02830Not Available+619097 - 61998731561.2

Displaying genes 1 – 10 of 5838 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00025382-(5-oxo-2,5-dihydrofuran-2-ylidene)acetateC6H3O4Chemical structure of 2-(5-oxo-2,5-dihydrofuran-2-ylidene)acetateNot available
Average139.087Da
Monoisotopic139.0036822Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm00174922-MaleylacetateC6H6O5Chemical structure of 2-Maleylacetate24740-88-3
Average158.1088Da
Monoisotopic158.021523302Da

Displaying 1–5 of 5 metabolites