Pantoea agglomerans strain CFBP13505

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Erwiniaceae

Genus

Pantoea

Description

Pantoea agglomerans strain CFBP13505 is a Gram-negative, rod-shaped bacterium characterized as a facultative anaerobe and a chemoheterotroph. This strain displays mobility, attributed to the presence of flagella, and thrives optimally at 30°C, falling within the mesophilic temperature range. P. agglomerans is found in multiple habitats, indicating its ecological versatility. It has been identified in association with various hosts, including Homo sapiens, Viridiplantae (plants), Triticum aestivum (wheat), Amphibia, and specific insect species such as Anopheles albimanus and Anopheles sp. This broad host range suggests a significant role in diverse ecological niches, possibly contributing to plant and human interactions. Clinically, Pantoea agglomerans strain CFBP13505 has been associated with various health effects, including peritonitis, septic arthritis, neonatal sepsis, synovitis, and occupational respiratory infections, among others. These associations highlight its potential impact on human health, particularly in immunocompromised individuals or those with underlying conditions. The presence of multiple replicons (four in total) may provide insights into its genetic adaptability and resilience in different environments. Understanding the ecological roles and health implications of P. agglomerans is essential, particularly in agricultural settings where it may interact with crops and livestock, and in clinical contexts where it may pose risks to human health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyErwiniaceae
GenusPantoea
SpeciesPantoea agglomerans
Strainstrain CFBP13505

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Pantoea agglomerans strain CFBP13505
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Pantoea agglomerans strain CFBP13505 plasmid punamed3, complete

Gene Summary

Adenine Count

35234 bp

Thymine Count

36257 bp

Guanine Count

35095 bp

Cytosine Count

35730 bp

Genome Length

142316 bp

Protein-coding Genes

135 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type 1 glutamine amidotransferase domain-containing proteinPagCFBP13505_RS19860Not AvailablePositive1 - 68124051.2
lysr family transcriptional regulatorPagCFBP13505_RS19865Not AvailableNegative1766 - 267733397.8
srpbcc domain-containing proteinPagCFBP13505_RS19870Not AvailablePositive2838 - 335318896.2
phenolic acid decarboxylasePagCFBP13505_RS19875Not AvailablePositive4200 - 472420143.4
h(+)/cl(-) exchange transporter clcaPagCFBP13505_RS19880Not AvailableNegative4744 - 607246844.0
yics family proteinPagCFBP13505_RS19885Not AvailableNegative6227 - 653511552.9
fad-dependent oxidoreductasePagCFBP13505_RS19890Not AvailablePositive6701 - 792745171.9
eal domain-containing proteinPagCFBP13505_RS19895Not AvailablePositive8080 - 985266564.6
abc transporter substrate-binding proteinPagCFBP13505_RS19900Not AvailableNegative9889 - 1082434406.5
abc transporter permeasePagCFBP13505_RS19905Not AvailableNegative10848 - 1160927132.4

Displaying genes 1 – 10 of 4621 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PeritonitisCausesPMC3079607
Neonatal sepsisCausesPMC4560869
Septic arthritisCausesPMC4560869
SynovitisCausesPMC4560869
CholelithiasisCausesPMC4560869
Occupational respiratory infectionsCausesPMC4560869
Skin allergyCausesPMC4560869
PeritonitisCausesPMC4560869
Blood stream infectionCausesPMC4560869
Early onset neonatal sepsisCausesPMC4560869

Displaying health effects 1 – 10 of 12 in total