Acinetobacter variabilis strain AV_175

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Acinetobacter

Description

Acinetobacter variabilis strain AV_175 is characterized by having two replicons, indicative of its genomic structure. The strain is cataloged under the accessions NZ_CP078028.1 and NZ_CP078032.1, which are crucial for referencing its genetic material in databases and for further research. The presence of two replicons can suggest a complex genomic organization that may contribute to the strain's adaptability and survival in various environments. Acinetobacter species are known for their ability to thrive in diverse ecological niches, including soil, water, and clinical settings, which can influence their pathogenic potential and resistance to antimicrobial agents. Understanding the genetic basis of Acinetobacter variabilis strain AV_175 through its replicons can provide insights into its metabolic capabilities and ecological roles. The strain's genomic features may offer clues regarding its interactions within microbial communities, including its capacity for nutrient cycling and its response to environmental stressors. This knowledge can be pivotal in studying the strain's behavior in natural ecosystems and its implications for public health, especially considering the relevance of Acinetobacter species in antibiotic resistance and infection control.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusAcinetobacter
SpeciesAcinetobacter variabilis
Strainstrain AV_175

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Acinetobacter variabilis strain AV_175
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acinetobacter variabilis strain AV_175


Gene Summary

Adenine Count

60188 bp

Thymine Count

60150 bp

Guanine Count

38539 bp

Cytosine Count

38088 bp

Genome Length

196965 bp

Protein-coding Genes

214 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyrroloquinoline quinone biosynthesis protein pqqeEGK58_RS15605Not AvailablePositive32261 - 3341243773.2
dipeptidaseEGK58_RS15610Not AvailablePositive33430 - 3447639412.0
hypothetical proteinEGK58_RS15615Not AvailablePositive34786 - 349837575.22
potassium transporter kupEGK58_RS15620Not AvailableNegative35050 - 3692768871.3
recombinase family proteinEGK58_RS15625Not AvailablePositive37591 - 3815721531.2
is66 family transposaseEGK58_RS15630Not AvailableNegative38515 - 4014062292.3
is66 family insertion sequence element accessory protein tnpbEGK58_RS15635Not AvailableNegative40215 - 4055012843.0
transposaseEGK58_RS15640Not AvailableNegative40547 - 4093014104.0
thiol:disulfide interchange protein dsba/dsblEGK58_RS15645Not AvailablePositive41554 - 4216823036.1
type ii toxin-antitoxin system rele/pare family toxinEGK58_RS15650Not AvailableNegative42456 - 4322129033.2

Displaying genes 31 – 40 of 218 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

19 records
Metabolite IDMetabolite nameStructureCAS number
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003208L-2-acetamido-6-oxoheptanedioateC9H11NO6Chemical structure of L-2-acetamido-6-oxoheptanedioateNot available
Average229.189Da
Monoisotopic229.059734238Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003696N-acetyl-(2S,6S)-2,6-diaminoheptanedioateC9H15N2O5Chemical structure of N-acetyl-(2S,6S)-2,6-diaminoheptanedioateNot available
Average231.229Da
Monoisotopic231.098645171Da
BASm00044082-oxo-dAMPC10H14N5O7PChemical structure of 2-oxo-dAMPNot available
Average347.2212Da
Monoisotopic347.0630843Da
BASm0007679isolithocholateC24H39O3Chemical structure of isolithocholateNot available
Average375.574Da
Monoisotopic375.2904687Da
BASm0007680isochenodeoxycholateC24H39O4Chemical structure of isochenodeoxycholateNot available
Average391.573Da
Monoisotopic391.2853833Da

Displaying 1–10 of 19 metabolites

Health Effects

No health effects information available for this bacterium.