Acinetobacter variabilis strain AV_175

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Acinetobacter

Description

Acinetobacter variabilis strain AV_175 is characterized by having two replicons, indicative of its genomic structure. The strain is cataloged under the accessions NZ_CP078028.1 and NZ_CP078032.1, which are crucial for referencing its genetic material in databases and for further research. The presence of two replicons can suggest a complex genomic organization that may contribute to the strain's adaptability and survival in various environments. Acinetobacter species are known for their ability to thrive in diverse ecological niches, including soil, water, and clinical settings, which can influence their pathogenic potential and resistance to antimicrobial agents. Understanding the genetic basis of Acinetobacter variabilis strain AV_175 through its replicons can provide insights into its metabolic capabilities and ecological roles. The strain's genomic features may offer clues regarding its interactions within microbial communities, including its capacity for nutrient cycling and its response to environmental stressors. This knowledge can be pivotal in studying the strain's behavior in natural ecosystems and its implications for public health, especially considering the relevance of Acinetobacter species in antibiotic resistance and infection control.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusAcinetobacter
SpeciesAcinetobacter variabilis
Strainstrain AV_175

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Acinetobacter variabilis strain AV_175
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acinetobacter variabilis strain AV_175


Gene Summary

Adenine Count

1100 bp

Thymine Count

1397 bp

Guanine Count

813 bp

Cytosine Count

916 bp

Genome Length

4226 bp

Protein-coding Genes

4 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excinuclease abc subunit uvraEGK58_RS15455Not AvailablePositive955 - 362197173.3
type ii toxin-antitoxin system rele/pare family toxinEGK58_RS15460Not AvailablePositive3788 - 40369552.72
hypothetical proteinEGK58_RS15465Not AvailablePositive4190 - 486125622.9
tyrosine-type recombinase/integraseEGK58_RS15470Not AvailablePositive4858 - 9906194973.0
hnh endonuclease signature motif containing proteinEGK58_RS15475Not AvailablePositive10699 - 1235463789.6
atp-binding proteinEGK58_RS15480Not AvailablePositive12905 - 1413747494.8
type ii toxin-antitoxin system rele/pare family toxinEGK58_RS15485Not AvailableNegative14409 - 1473912101.7
type ii toxin-antitoxin system rele/pare family toxinEGK58_RS15490Not AvailablePositive14948 - 150644722.86
is3 family transposaseEGK58_RS15495Not AvailableNegative15184 - 1640347003.2
yqae/pmp3 family membrane proteinEGK58_RS15500Not AvailableNegative16565 - 167537232.23

Displaying genes 1 – 10 of 218 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.