Pseudooceanicola algae strain Lw-13e

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudooceanicola

Description

Pseudooceanicola algae strain Lw-13e is characterized as a Gram-negative, rod-shaped bacterium. This strain exhibits a unique genomic structure, possessing three distinct replicons, which may contribute to its adaptability in various environments. The specific accessions associated with Pseudooceanicola Lw-13e include NZ_CP060436.1, NZ_CP060437.1, and NZ_CP060439.1, which provide a basis for further genetic and functional studies. As a member of the Pseudooceanicola genus, this strain is likely adapted to specific ecological niches, possibly including marine environments, given the genus's known associations. The Gram-negative status indicates the presence of an outer membrane, which may play a role in the organism's resistance to certain antibiotics and its overall interaction with the surrounding environment. The presence of multiple replicons suggests a complex regulation of its genetic material, which could facilitate rapid responses to environmental changes or stresses. This trait may also enhance its survival and metabolic versatility, allowing it to thrive in diverse conditions. Ecologically, the adaptability of Pseudooceanicola Lw-13e may have implications for nutrient cycling within its habitat, potentially influencing the dynamics of microbial communities and nutrient availability. Further research into this strain could yield insights into its role in marine ecosystems and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudooceanicola
SpeciesPseudooceanicola algae
Strainstrain Lw-13e

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudooceanicola algae strain Lw-13e plasmid p49, complete

Gene Summary

Adenine Count

8868 bp

Thymine Count

9143 bp

Guanine Count

15954 bp

Cytosine Count

15293 bp

Genome Length

49258 bp

Protein-coding Genes

32 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aaa family atpasePSAL_RS18020Not AvailablePositive93681 - 9510553228.6
parb/repb/spo0j family partition proteinPSAL_RS18025Not AvailablePositive95109 - 9619739696.6
gntr family transcriptional regulatorPSAL_RS18030Not AvailablePositive96566 - 9730027930.0
trap transporter large permease subunitPSAL_RS18035Not AvailableNegative97317 - 9863045671.7
trap transporter small permeasePSAL_RS18040Not AvailableNegative98645 - 9913617350.0
trap transporter substrate-binding protein dctpPSAL_RS18045Not AvailableNegative99210 - 10023237025.9
3-hydroxybutyryl-coa dehydrogenasePSAL_RS18050Not AvailableNegative100432 - 10140934796.1
nad/nadp-dependent octopine/nopaline dehydrogenase family proteinPSAL_RS18055Not AvailableNegative101406 - 10249738393.1
hypothetical proteinPSAL_RS18060Not AvailablePositive102678 - 1028877184.49
hypothetical proteinPSAL_RS18065Not AvailablePositive103097 - 10404134724.5

Displaying genes 121 – 130 of 3736 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.