Pseudooceanicola algae strain Lw-13e

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudooceanicola

Description

Pseudooceanicola algae strain Lw-13e is characterized as a Gram-negative, rod-shaped bacterium. This strain exhibits a unique genomic structure, possessing three distinct replicons, which may contribute to its adaptability in various environments. The specific accessions associated with Pseudooceanicola Lw-13e include NZ_CP060436.1, NZ_CP060437.1, and NZ_CP060439.1, which provide a basis for further genetic and functional studies. As a member of the Pseudooceanicola genus, this strain is likely adapted to specific ecological niches, possibly including marine environments, given the genus's known associations. The Gram-negative status indicates the presence of an outer membrane, which may play a role in the organism's resistance to certain antibiotics and its overall interaction with the surrounding environment. The presence of multiple replicons suggests a complex regulation of its genetic material, which could facilitate rapid responses to environmental changes or stresses. This trait may also enhance its survival and metabolic versatility, allowing it to thrive in diverse conditions. Ecologically, the adaptability of Pseudooceanicola Lw-13e may have implications for nutrient cycling within its habitat, potentially influencing the dynamics of microbial communities and nutrient availability. Further research into this strain could yield insights into its role in marine ecosystems and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudooceanicola
SpeciesPseudooceanicola algae
Strainstrain Lw-13e

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudooceanicola algae strain Lw-13e plasmid p202, complete

Gene Summary

Adenine Count

35892 bp

Thymine Count

36967 bp

Guanine Count

65521 bp

Cytosine Count

64030 bp

Genome Length

202410 bp

Protein-coding Genes

180 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dde-type integrase/transposase/recombinasePSAL_RS19400Not AvailableNegative5193 - 53004204.21
hypothetical proteinPSAL_RS19040Not AvailableNegative5448 - 652740056.4
utp--glucose-1-phosphate uridylyltransferase galuPSAL_RS19045Not AvailableNegative7556 - 844932282.0
o-antigen ligase family proteinPSAL_RS19050Not AvailableNegative8722 - 998446993.3
acyltransferase family proteinPSAL_RS19055Not AvailableNegative9987 - 1107840157.5
polysaccharide pyruvyl transferase family proteinPSAL_RS19060Not AvailableNegative11082 - 1217639769.2
lipopolysaccharide biosynthesis proteinPSAL_RS19065Not AvailableNegative12173 - 1350146965.9
tolb family proteinPSAL_RS19070Not AvailableNegative13505 - 1486649584.3
glycosyltransferase family 2 proteinPSAL_RS19075Not AvailableNegative14874 - 1584836126.4
sugar transferasePSAL_RS19080Not AvailableNegative15968 - 1660624482.5

Displaying genes 1 – 10 of 3736 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.