Mucilaginibacter rubeus strain P1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Mucilaginibacter

Description

Mucilaginibacter rubeus strain P1 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for possessing a single replicon, which is an important trait for understanding its genetics and replication mechanisms. The strain is cataloged under the accession number NZ_CP043450.1, providing a reference for genomic studies and further research. As a member of the genus Mucilaginibacter, which is known for its diverse ecological roles, strain P1 may contribute to soil and sediment microbial communities. Members of this genus often exhibit a capacity for polysaccharide degradation, which suggests that Mucilaginibacter rubeus could play a role in nutrient cycling within its environment. This capability is significant, as it can influence soil health and fertility, particularly in areas where organic matter decomposition is crucial. In summary, Mucilaginibacter rubeus strain P1 exemplifies characteristics typical of Gram-negative rod bacteria, with a single replicon that may inform its genetic behavior. The ecological implications of its polysaccharide degradation abilities highlight the potential role of this strain in sustaining ecosystem functions, particularly in terms of nutrient recycling and maintaining soil quality. Further research on this strain could provide insights into its specific contributions to microbial diversity and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusMucilaginibacter
SpeciesMucilaginibacter rubeus
Strainstrain P1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrumen; soil
Biotic relationshipNot Available
Host(s)Ovis aries
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mucilaginibacter rubeus strain P1 chromosome, complete genome.

Gene Summary

Adenine Count

2174964 bp

Thymine Count

2179733 bp

Guanine Count

1635077 bp

Cytosine Count

1643029 bp

Genome Length

7632803 bp

Protein-coding Genes

6238 genes

Non-Coding Genes

90 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine--trna ligaseDEO27_RS26515Not AvailableNegative6566493 - 656856578689.7
s66 peptidase family proteinDEO27_RS26520Not AvailablePositive6568704 - 656960633061.6
ligase-associated dna damage response exonucleaseDEO27_RS26525Not AvailablePositive6569845 - 657095141278.5
atp-dependent dna ligaseDEO27_RS26530Not AvailablePositive6570948 - 657256461779.0
maoc family dehydrataseDEO27_RS26535Not AvailablePositive6572627 - 657308817522.2
nicotinate (nicotinamide) nucleotide adenylyltransferaseDEO27_RS26540Not AvailableNegative6573360 - 657393221870.6
four helix bundle proteinDEO27_RS26545Not AvailableNegative6574007 - 657437814519.5
guanylate kinaseDEO27_RS26550Not AvailableNegative6574417 - 657498621592.9
yicc/yloc family endoribonucleaseDEO27_RS26555Not AvailableNegative6575088 - 657596333113.7
hypothetical proteinDEO27_RS26560Not AvailablePositive6576198 - 657700730900.2

Displaying genes 5401 – 5410 of 6328 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.