Staphylococcus epidermidis strain HD33

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Staphylococcaceae

Genus

Staphylococcus

Description

Staphylococcus epidermidis strain HD33 is a Gram-positive, cocci-shaped bacterium that typically occurs in clusters and singles. This strain is a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments, with an optimal growth temperature of 30°C, indicative of its mesophilic nature. S. epidermidis HD33 is non-motile and does possess flagella, which may play a role in its biological processes, though it is not involved in mobility. This strain is associated with various hosts, including Homo sapiens, Bos taurus, Phocidae, and Equidae, highlighting its adaptability to different biological environments. S. epidermidis HD33 is primarily free-living but can also act as an opportunistic pathogen, leading to a range of health complications in humans. It is known to be implicated in urinary tract infections (UTIs), peritonitis, bloodstream infections, late-onset sepsis, pyelonephritis, prosthetic valve endocarditis, infections associated with central venous catheters, and cerebrospinal fluid shunt meningitis. Additionally, it can cause acute bacterial meningitis and infections related to implanted cardiac devices. The presence of this strain in various hosts and its association with significant health issues underscore its role in both human health and its ecological niche. Understanding the characteristics and pathogenic potential of S. epidermidis HD33 could help in developing strategies for managing infections, particularly in clinical settings where prosthetic devices are involved.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyStaphylococcaceae
GenusStaphylococcus
SpeciesStaphylococcus epidermidis
Strainstrain HD33

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Staphylococcus epidermidis strain HD33
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Bos taurus, Ovis aries
Cell arrangementClusters - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Staphylococcus epidermidis strain HD33


Gene Summary

Adenine Count

769 bp

Thymine Count

875 bp

Guanine Count

306 bp

Cytosine Count

410 bp

Genome Length

2360 bp

Protein-coding Genes

2 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinFHK91_RS08505Not AvailableNegative1734030 - 173471326463.4
Capsid and scaffold proteinFHK91_RS08510Not AvailableNegative1734842 - 17350969588.54
Head-tail adaptorFHK91_RS08515Not AvailableNegative1735089 - 173541812693.9
Capsid and scaffold proteinFHK91_RS08520Not AvailableNegative1735411 - 173572511948.2
Rho termination proteinFHK91_RS08525Not AvailableNegative1735725 - 173601511222.2
Major head proteinFHK91_RS08530Not AvailableNegative1736032 - 173686229596.1
Putative phage minor capsid proteinFHK91_RS08535Not AvailableNegative1736880 - 173747622818.5
Tail length tape-measure proteinFHK91_RS08540Not AvailableNegative1737591 - 17377977905.28
Minor capsid proteinFHK91_RS08545Not AvailableNegative1737905 - 173885836582.7
Portal proteinFHK91_RS08550Not AvailableNegative1738815 - 174025156110.8

Displaying genes 21 – 30 of 33 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PyelonephritisCausesPMC4308012
Prosthetic valve endocarditisCausesPMC4308012
Central venous catheter infectionsCausesPMC4308012
Cerebrospinal fluid shunt meningitisCausesPMC4308012
UtiCausesPMC4308012
Late-onset sepsisCausesPMC4601917
Infections of implanted cardiac devicesCausesPMC6060398
Acute bacterial meningitisCausesPMC6306750
Bloodstream infectionsCausesPMC8471643
PeritonitisCausesPMC7747055

Displaying health effects 1 – 10 of 11 in total