Staphylococcus epidermidis strain HD33

Gram-positiveCocciNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Staphylococcaceae

Genus

Staphylococcus

Description

Staphylococcus epidermidis strain HD33 is a Gram-positive, cocci-shaped bacterium that typically occurs in clusters and singles. This strain is a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments, with an optimal growth temperature of 30°C, indicative of its mesophilic nature. S. epidermidis HD33 is non-motile and does possess flagella, which may play a role in its biological processes, though it is not involved in mobility. This strain is associated with various hosts, including Homo sapiens, Bos taurus, Phocidae, and Equidae, highlighting its adaptability to different biological environments. S. epidermidis HD33 is primarily free-living but can also act as an opportunistic pathogen, leading to a range of health complications in humans. It is known to be implicated in urinary tract infections (UTIs), peritonitis, bloodstream infections, late-onset sepsis, pyelonephritis, prosthetic valve endocarditis, infections associated with central venous catheters, and cerebrospinal fluid shunt meningitis. Additionally, it can cause acute bacterial meningitis and infections related to implanted cardiac devices. The presence of this strain in various hosts and its association with significant health issues underscore its role in both human health and its ecological niche. Understanding the characteristics and pathogenic potential of S. epidermidis HD33 could help in developing strategies for managing infections, particularly in clinical settings where prosthetic devices are involved.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyStaphylococcaceae
GenusStaphylococcus
SpeciesStaphylococcus epidermidis
Strainstrain HD33

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Staphylococcus epidermidis strain HD33
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Bos taurus, Ovis aries
Cell arrangementClusters - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Staphylococcus epidermidis strain HD33


Gene Summary

Adenine Count

850381 bp

Thymine Count

834108 bp

Guanine Count

400664 bp

Cytosine Count

395319 bp

Genome Length

2484772 bp

Protein-coding Genes

2283 genes

Non-Coding Genes

141 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein repFHK91_RS12485Not AvailableNegative56 - 105438962.7
quaternary ammonium compound efflux smr transporter qaccFHK91_RS12490Not AvailablePositive1382 - 170511673.7
AttlNot AvailableNot AvailablePositive1711803 - 1711814Not Available
AmidaseFHK91_RS08420Not AvailableNegative1715820 - 171754465878.2
HolinFHK91_RS08425Not AvailableNegative1717557 - 171784410448.9
Hypothetical proteinFHK91_RS08430Not AvailableNegative1717906 - 17180525712.79
Hypothetical proteinFHK91_RS08435Not AvailableNegative1718045 - 171839813527.6
Tail fiber proteinFHK91_RS08440Not AvailableNegative1718410 - 171939336357.0
Bifunctional autolysin atl/n-acetylmuramoyl-l-alanine amidase/endo-beta-n-acetylglucosaminidaseFHK91_RS08445Not AvailableNegative1719448 - 172123568389.2
Hypothetical proteinFHK91_RS08450Not AvailableNegative1721734 - 172203311675.1

Displaying genes 1 – 10 of 33 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PyelonephritisCausesPMC4308012
Prosthetic valve endocarditisCausesPMC4308012
Central venous catheter infectionsCausesPMC4308012
Cerebrospinal fluid shunt meningitisCausesPMC4308012
UtiCausesPMC4308012
Late-onset sepsisCausesPMC4601917
Infections of implanted cardiac devicesCausesPMC6060398
Acute bacterial meningitisCausesPMC6306750
Bloodstream infectionsCausesPMC8471643
PeritonitisCausesPMC7747055

Displaying health effects 1 – 10 of 11 in total