Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Trinickia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Burkholderiaceae |
| Genus | Trinickia |
| Species | Trinickia violacea |
| Strain | strain DHOD12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Trinickia violacea strain DHOD12 chromosome 3, complete sequence.
Gene Summary
Adenine Count
21058 bp
Thymine Count
20619 bp
Guanine Count
32475 bp
Cytosine Count
31198 bp
Genome Length
105350 bp
Protein-coding Genes
90 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | FAZ95_RS38875 | Not Available | Negative | 48537 - 49739 | 43545.9 |
| helix-turn-helix domain-containing protein | FAZ95_RS38880 | Not Available | Positive | 50329 - 51255 | 34871.9 |
| plp-dependent aminotransferase family protein | FAZ95_RS38885 | Not Available | Positive | 51500 - 52669 | 42189.3 |
| methyltransferase domain-containing protein | FAZ95_RS38890 | Not Available | Positive | 52810 - 53643 | 31005.9 |
| class i sam-dependent methyltransferase | FAZ95_RS38895 | Not Available | Positive | 53668 - 54627 | 34962.0 |
| site-2 protease family protein | FAZ95_RS38900 | Not Available | Positive | 54624 - 55766 | 42007.0 |
| tgla family ripp precursor | FAZ95_RS38905 | Not Available | Positive | 55840 - 56019 | 6257.0 |
| duf692 domain-containing protein | FAZ95_RS38910 | Not Available | Positive | 56026 - 56985 | 36000.8 |
| hypothetical protein | FAZ95_RS38915 | Not Available | Positive | 56982 - 57827 | 31531.7 |
| lantibiotic dehydratase | FAZ95_RS38920 | Not Available | Positive | 57824 - 60322 | 92409.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
