Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP6625 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain CFBP6625 plasmid pAtCFBP6625b,
Gene Summary
Adenine Count
81122 bp
Thymine Count
81403 bp
Guanine Count
112209 bp
Cytosine Count
112191 bp
Genome Length
386925 bp
Protein-coding Genes
385 genes
Non-Coding Genes
17 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | CFBP6625_RS05490 | Not Available | Positive | 1082034 - 1082603 | 21935.7 |
| type ii toxin-antitoxin system rata family toxin | CFBP6625_RS05495 | Not Available | Positive | 1082613 - 1083068 | 17573.1 |
| cina family protein | CFBP6625_RS05500 | Not Available | Negative | 1083050 - 1083559 | 17576.2 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | CFBP6625_RS05505 | Not Available | Negative | 1083556 - 1084743 | 41585.7 |
| trna dihydrouridine synthase dusb | CFBP6625_RS05510 | Not Available | Positive | 1085020 - 1086036 | 36789.4 |
| two-component system sensor histidine kinase ntrb | CFBP6625_RS05515 | Not Available | Positive | 1086033 - 1087181 | 41348.4 |
| nitrogen regulation protein nr(i) | CFBP6625_RS05520 | Not Available | Positive | 1087178 - 1088629 | 53906.0 |
| sensor histidine kinase ntry-like | CFBP6625_RS05525 | Not Available | Positive | 1088780 - 1091041 | 82448.3 |
| sigma-54-dependent transcriptional regulator | CFBP6625_RS05530 | Not Available | Positive | 1091031 - 1092395 | 50392.3 |
| trk system potassium transporter trka | CFBP6625_RS05535 | Not Available | Positive | 1092444 - 1093820 | 50096.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


