Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP6625 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium tumefaciens strain CFBP6625 chromosome circular,
Gene Summary
Adenine Count
626862 bp
Thymine Count
617208 bp
Guanine Count
896623 bp
Cytosine Count
913302 bp
Genome Length
3053995 bp
Protein-coding Genes
2802 genes
Non-Coding Genes
189 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 351450 - 351466 | Not Available |
| Diguanylate cyclase | CFBP6625_RS27830 | Not Available | Positive | 352502 - 354925 | 89090.0 |
| Transposase | CFBP6625_RS27835 | Not Available | Negative | 355069 - 355290 | 8413.25 |
| hypothetical protein | CFBP6625_RS29040 | Not Available | Negative | 356202 - 356522 | 12077.0 |
| type ii toxin-antitoxin system mqsa family antitoxin | CFBP6625_RS27845 | Not Available | Negative | 356519 - 356755 | 8812.52 |
| Transposase | CFBP6625_RS27850 | Not Available | Negative | 356733 - 357059 | 12984.8 |
| Lactose operon repressor | CFBP6625_RS27855 | Not Available | Negative | 357167 - 358162 | 35711.8 |
| hypothetical protein | CFBP6625_RS27860 | Not Available | Negative | 358188 - 358412 | 7930.41 |
| Transposase, putative | CFBP6625_RS27865 | Not Available | Negative | 358538 - 359290 | 29269.5 |
| Attl | Not Available | Not Available | Positive | 359340 - 359377 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


