Agrobacterium tumefaciens strain CFBP6625

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens strain CFBP6625 is a Gram-negative, rod-shaped bacterium that thrives in various habitats, displaying an optimal growth temperature of 25.0°C. This strain, like other members of the Agrobacterium genus, is an aerobic organism, requiring oxygen for its metabolic processes. The versatility in habitat suggests that A. tumefaciens strain CFBP6625 may play a role in diverse ecological niches, potentially engaging in interactions with a range of plant hosts. This adaptability to multiple environments could facilitate its ability to participate in plant-associated microbial communities, where it may contribute to nutrient cycling or interact with other microorganisms. The aerobic nature of this strain highlights its requirement for environments rich in oxygen, which may influence its distribution and ecological roles, particularly in soil and rhizosphere settings. Understanding the specific interactions and contributions of A. tumefaciens strain CFBP6625 within its habitats could provide insights into its ecological significance and the broader context of microbial dynamics in plant-associated systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strainstrain CFBP6625

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens strain CFBP6625
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens strain CFBP6625


Gene Summary

Adenine Count

81122 bp

Thymine Count

81403 bp

Guanine Count

112209 bp

Cytosine Count

112191 bp

Genome Length

386925 bp

Protein-coding Genes

385 genes

Non-Coding Genes

17 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+351450 - 351466Not Available
Diguanylate cyclaseCFBP6625_RS27830Not Available+352502 - 35492589090.0
TransposaseCFBP6625_RS27835Not Available-355069 - 3552908413.25
hypothetical proteinCFBP6625_RS29040Not Available-356202 - 35652212077.0
type ii toxin-antitoxin system mqsa family antitoxinCFBP6625_RS27845Not Available-356519 - 3567558812.52
TransposaseCFBP6625_RS27850Not Available-356733 - 35705912984.8
Lactose operon repressorCFBP6625_RS27855Not Available-357167 - 35816235711.8
hypothetical proteinCFBP6625_RS27860Not Available-358188 - 3584127930.41
Transposase, putativeCFBP6625_RS27865Not Available-358538 - 35929029269.5
AttlNot AvailableNot Available+359340 - 359377Not Available

Displaying genes 1 – 10 of 5587 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites