Citrobacter portucalensis strain Effluent_1

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter portucalensis strain Effluent_1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contributes to its motility. This strain has a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and adaptation in its environment. Its genomic data is cataloged under the accession number NZ_CP039327.1, providing a reference for further studies and comparisons with other strains. As a member of the Citrobacter genus, which is known for its versatility in various habitats, C. portucalensis strain Effluent_1 may play a role in nutrient cycling and the degradation of organic matter, particularly in effluent environments where it was isolated. The ability of this bacterium to thrive in such conditions suggests a potential for bioremediation applications, where its metabolic capabilities could be harnessed to treat wastewater or contaminated sites. The presence of flagella not only enhances its motility but may also confer an ecological advantage in dynamic environments, allowing it to navigate towards nutrient sources or evade adverse conditions. Overall, Citrobacter portucalensis strain Effluent_1 exemplifies the adaptability and ecological importance of bacteria in managing and mitigating the impacts of effluent discharge on natural ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter portucalensis
Strainstrain Effluent_1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter portucalensis strain Effluent_1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut microbiome
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter portucalensis strain Effluent_1 chromosome, complete

Gene Summary

Adenine Count

1198898 bp

Thymine Count

1203576 bp

Guanine Count

1305792 bp

Cytosine Count

1309829 bp

Genome Length

5018095 bp

Protein-coding Genes

4587 genes

Non-Coding Genes

277 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell division protein ftspE7703_RS20860Not AvailableNegative4245810 - 424722251925.2
1-acylglycerol-3-phosphate o-acyltransferaseE7703_RS20865Not AvailableNegative4247294 - 424803127415.9
dna topoisomerase iv subunit aE7703_RS20870Not AvailableNegative4248227 - 425048583828.2
ygiw/ydei family stress tolerance ob fold proteinE7703_RS20875Not AvailableNegative4250604 - 425100214155.7
quorum sensing response regulator transcription factor qsebE7703_RS20880Not AvailablePositive4251151 - 425181024098.2
quorum sensing histidine kinase qsecE7703_RS20885Not AvailablePositive4251807 - 425315650368.6
nad(p)h-dependent oxidoreductaseE7703_RS20890Not AvailablePositive4253266 - 425384721712.8
putative quinol monooxygenaseE7703_RS20895Not AvailablePositive4253878 - 425419211513.9
dna topoisomerase iv subunit bE7703_RS20900Not AvailableNegative4254299 - 425619170148.6
esterase yqiaE7703_RS20905Not AvailableNegative4256220 - 425680121707.9

Displaying genes 4151 – 4160 of 4864 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.