Citrobacter portucalensis strain Effluent_1

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter portucalensis strain Effluent_1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contributes to its motility. This strain has a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and adaptation in its environment. Its genomic data is cataloged under the accession number NZ_CP039327.1, providing a reference for further studies and comparisons with other strains. As a member of the Citrobacter genus, which is known for its versatility in various habitats, C. portucalensis strain Effluent_1 may play a role in nutrient cycling and the degradation of organic matter, particularly in effluent environments where it was isolated. The ability of this bacterium to thrive in such conditions suggests a potential for bioremediation applications, where its metabolic capabilities could be harnessed to treat wastewater or contaminated sites. The presence of flagella not only enhances its motility but may also confer an ecological advantage in dynamic environments, allowing it to navigate towards nutrient sources or evade adverse conditions. Overall, Citrobacter portucalensis strain Effluent_1 exemplifies the adaptability and ecological importance of bacteria in managing and mitigating the impacts of effluent discharge on natural ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter portucalensis
Strainstrain Effluent_1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter portucalensis strain Effluent_1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut microbiome
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter portucalensis strain Effluent_1 chromosome, complete

Gene Summary

Adenine Count

1198898 bp

Thymine Count

1203576 bp

Guanine Count

1305792 bp

Cytosine Count

1309829 bp

Genome Length

5018095 bp

Protein-coding Genes

4587 genes

Non-Coding Genes

277 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadp-dependent oxaloacetate-decarboxylating malate dehydrogenaseE7703_RS17450Not AvailableNegative3516481 - 351876082158.9
transketolaseE7703_RS17455Not AvailablePositive3519041 - 352103572753.1
duf1176 domain-containing proteinE7703_RS17460Not AvailableNegative3521025 - 352206838512.1
gdp-mannose pyrophosphatase nudkE7703_RS17465Not AvailableNegative3522192 - 352276721774.1
formate-dependent uric acid utilization protein aegaE7703_RS17470Not AvailableNegative3522924 - 352490371877.0
nitrate/nitrite two-component system sensor histidine kinase narqE7703_RS17475Not AvailablePositive3525164 - 352686163410.4
multidrug efflux rnd transporter permease acrdE7703_RS17480Not AvailablePositive3527046 - 3530159112996.0
protein ypfmE7703_RS17485Not AvailableNegative3530235 - 35302942408.02
arsc family reductaseE7703_RS17490Not AvailablePositive3530684 - 353104013422.2
succinyl-diaminopimelate desuccinylaseE7703_RS17495Not AvailablePositive3531044 - 353217141449.7

Displaying genes 3481 – 3490 of 4864 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.