Citrobacter portucalensis strain Effluent_1

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter portucalensis strain Effluent_1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contributes to its motility. This strain has a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and adaptation in its environment. Its genomic data is cataloged under the accession number NZ_CP039327.1, providing a reference for further studies and comparisons with other strains. As a member of the Citrobacter genus, which is known for its versatility in various habitats, C. portucalensis strain Effluent_1 may play a role in nutrient cycling and the degradation of organic matter, particularly in effluent environments where it was isolated. The ability of this bacterium to thrive in such conditions suggests a potential for bioremediation applications, where its metabolic capabilities could be harnessed to treat wastewater or contaminated sites. The presence of flagella not only enhances its motility but may also confer an ecological advantage in dynamic environments, allowing it to navigate towards nutrient sources or evade adverse conditions. Overall, Citrobacter portucalensis strain Effluent_1 exemplifies the adaptability and ecological importance of bacteria in managing and mitigating the impacts of effluent discharge on natural ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter portucalensis
Strainstrain Effluent_1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter portucalensis strain Effluent_1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut microbiome
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter portucalensis strain Effluent_1 chromosome, complete

Gene Summary

Adenine Count

1198898 bp

Thymine Count

1203576 bp

Guanine Count

1305792 bp

Cytosine Count

1309829 bp

Genome Length

5018095 bp

Protein-coding Genes

4587 genes

Non-Coding Genes

277 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
envelope stress response membrane protein pspbE7703_RS12860Not AvailableNegative2612945 - 26131698849.6
phage shock protein pspaE7703_RS12865Not AvailableNegative2613224 - 261389225481.3
phage shock protein operon transcriptional activatorE7703_RS12870Not AvailablePositive2614048 - 261503737296.1
quinolone resistance pentapeptide repeat protein qnrb6E7703_RS12875Not AvailablePositive2615132 - 261577623824.1
sdr family oxidoreductaseE7703_RS12880Not AvailableNegative2615868 - 261677632434.5
is1-like element is1a family transposaseE7703_RS12890Not AvailablePositive2617162 - 261785926524.3
hypothetical proteinE7703_RS12895Not AvailablePositive2617882 - 261819311299.5
abc transporter substrate-binding protein sapaE7703_RS12900Not AvailablePositive2618532 - 262017561465.0
peptide abc transporter permease sapbE7703_RS12905Not AvailablePositive2620172 - 262113736082.3
peptide abc transporter permease sapcE7703_RS12910Not AvailablePositive2621124 - 262201431574.1

Displaying genes 2651 – 2660 of 4864 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.