Citrobacter portucalensis strain Effluent_1

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter portucalensis strain Effluent_1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contributes to its motility. This strain has a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and adaptation in its environment. Its genomic data is cataloged under the accession number NZ_CP039327.1, providing a reference for further studies and comparisons with other strains. As a member of the Citrobacter genus, which is known for its versatility in various habitats, C. portucalensis strain Effluent_1 may play a role in nutrient cycling and the degradation of organic matter, particularly in effluent environments where it was isolated. The ability of this bacterium to thrive in such conditions suggests a potential for bioremediation applications, where its metabolic capabilities could be harnessed to treat wastewater or contaminated sites. The presence of flagella not only enhances its motility but may also confer an ecological advantage in dynamic environments, allowing it to navigate towards nutrient sources or evade adverse conditions. Overall, Citrobacter portucalensis strain Effluent_1 exemplifies the adaptability and ecological importance of bacteria in managing and mitigating the impacts of effluent discharge on natural ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter portucalensis
Strainstrain Effluent_1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter portucalensis strain Effluent_1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathuman gut microbiome
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter portucalensis strain Effluent_1 chromosome, complete

Gene Summary

Adenine Count

1198898 bp

Thymine Count

1203576 bp

Guanine Count

1305792 bp

Cytosine Count

1309829 bp

Genome Length

5018095 bp

Protein-coding Genes

4587 genes

Non-Coding Genes

277 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
leucyl/phenylalanyl-trna--protein transferaseE7703_RS08045Not AvailableNegative1663688 - 166439226678.0
heme abc transporter atp-binding protein/permease cydcE7703_RS08050Not AvailableNegative1664437 - 166615862534.6
heme abc transporter permease/atp-binding protein cyddE7703_RS08055Not AvailableNegative1666159 - 166792565040.1
thioredoxin-disulfide reductaseE7703_RS08060Not AvailableNegative1668040 - 166900834677.2
leucine-responsive transcriptional regulator lrpE7703_RS08065Not AvailablePositive1669556 - 167005018873.9
dna translocase ftskE7703_RS08070Not AvailablePositive1670185 - 1674210147483.0
outer membrane lipoprotein chaperone lolaE7703_RS08075Not AvailablePositive1674322 - 167493322629.4
replication-associated recombination protein raraE7703_RS08080Not AvailablePositive1674944 - 167628749577.7
serine--trna ligaseE7703_RS08085Not AvailablePositive1676380 - 167767248488.8
dimethylsulfoxide reductase subunit aE7703_RS08090Not AvailablePositive1677909 - 168035390528.7

Displaying genes 1791 – 1800 of 4864 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.