Rhodococcus sp. PAMC28705

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. PAMC28705 is a bacterial strain characterized by the presence of flagella, which may contribute to its motility and ecological interactions. It possesses a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation in its environment. The strain is cataloged under the accession number NZ_CP039254.1, which provides a reference for its genomic sequence and related research. Rhodococcus species are known for their versatile metabolic capabilities, particularly in the degradation of various organic compounds, including pollutants. Although specific metabolic traits of PAMC28705 are not detailed here, the presence of flagella suggests potential environmental adaptability, allowing the bacterium to explore diverse habitats and utilize available resources effectively. The ecological significance of Rhodococcus sp. PAMC28705 may lie in its role in bioremediation processes, particularly in environments contaminated with organic pollutants. Its motility, facilitated by flagella, could enhance its ability to colonize contaminated sites and contribute to the breakdown of harmful substances. Thus, Rhodococcus sp. PAMC28705 may serve as an important organism for studies focused on microbial ecology and environmental biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. PAMC28705
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. PAMC28705 chromosome, complete genome.

Gene Summary

Adenine Count

892804 bp

Thymine Count

900106 bp

Guanine Count

1467365 bp

Cytosine Count

1467088 bp

Genome Length

4727363 bp

Protein-coding Genes

4279 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron-siderophore abc transporter substrate-binding proteinE5769_RS03595Not AvailableNegative746926 - 74795435873.7
helix-turn-helix domain-containing proteinE5769_RS03600Not AvailableNegative748155 - 74892228250.7
cupin domain-containing proteinE5769_RS03605Not AvailablePositive748998 - 74933611726.0
hypothetical proteinE5769_RS03610Not AvailableNegative749702 - 75007313166.8
leucine--trna ligaseE5769_RS03615Not AvailableNegative750178 - 753012105151.0
sdpi family proteinE5769_RS03620Not AvailablePositive753082 - 75348613199.4
duf1648 domain-containing proteinE5769_RS03625Not AvailablePositive753494 - 75447734513.1
ggdef domain-containing proteinE5769_RS03630Not AvailablePositive754777 - 75571833828.0
marr family winged helix-turn-helix transcriptional regulatorE5769_RS03635Not AvailableNegative755876 - 75631616413.7
voc family proteinE5769_RS03640Not AvailablePositive756647 - 75756434328.7

Displaying genes 721 – 730 of 4340 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.