Rhodococcus sp. PAMC28705

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. PAMC28705 is a bacterial strain characterized by the presence of flagella, which may contribute to its motility and ecological interactions. It possesses a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation in its environment. The strain is cataloged under the accession number NZ_CP039254.1, which provides a reference for its genomic sequence and related research. Rhodococcus species are known for their versatile metabolic capabilities, particularly in the degradation of various organic compounds, including pollutants. Although specific metabolic traits of PAMC28705 are not detailed here, the presence of flagella suggests potential environmental adaptability, allowing the bacterium to explore diverse habitats and utilize available resources effectively. The ecological significance of Rhodococcus sp. PAMC28705 may lie in its role in bioremediation processes, particularly in environments contaminated with organic pollutants. Its motility, facilitated by flagella, could enhance its ability to colonize contaminated sites and contribute to the breakdown of harmful substances. Thus, Rhodococcus sp. PAMC28705 may serve as an important organism for studies focused on microbial ecology and environmental biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. PAMC28705
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. PAMC28705 chromosome, complete genome.

Gene Summary

Adenine Count

892804 bp

Thymine Count

900106 bp

Guanine Count

1467365 bp

Cytosine Count

1467088 bp

Genome Length

4727363 bp

Protein-coding Genes

4279 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)/fad-dependent oxidoreductaseE5769_RS16285Not AvailablePositive3555298 - 355621832382.3
marr family winged helix-turn-helix transcriptional regulatorE5769_RS16290Not AvailablePositive3556278 - 355673316247.8
duf5313 family proteinE5769_RS16295Not AvailablePositive3556730 - 355714915943.7
tetr/acrr family transcriptional regulatorE5769_RS16300Not AvailableNegative3557168 - 355779723074.3
tetr/acrr family transcriptional regulatorE5769_RS16305Not AvailablePositive3557876 - 355848721967.1
Trna-valNot AvailableNot AvailablePositive3558561 - 3558632Not Available
peroxiredoxinE5769_RS16315Not AvailableNegative3558781 - 355924516856.8
duf3052 domain-containing proteinE5769_RS16320Not AvailableNegative3559271 - 355969315111.4
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeE5769_RS16325Not AvailablePositive3560041 - 3562782101472.0
pucr family transcriptional regulatorE5769_RS16330Not AvailablePositive3562858 - 356430651558.2

Displaying genes 3281 – 3290 of 4340 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.