Rhodococcus sp. PAMC28705

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. PAMC28705 is a bacterial strain characterized by the presence of flagella, which may contribute to its motility and ecological interactions. It possesses a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation in its environment. The strain is cataloged under the accession number NZ_CP039254.1, which provides a reference for its genomic sequence and related research. Rhodococcus species are known for their versatile metabolic capabilities, particularly in the degradation of various organic compounds, including pollutants. Although specific metabolic traits of PAMC28705 are not detailed here, the presence of flagella suggests potential environmental adaptability, allowing the bacterium to explore diverse habitats and utilize available resources effectively. The ecological significance of Rhodococcus sp. PAMC28705 may lie in its role in bioremediation processes, particularly in environments contaminated with organic pollutants. Its motility, facilitated by flagella, could enhance its ability to colonize contaminated sites and contribute to the breakdown of harmful substances. Thus, Rhodococcus sp. PAMC28705 may serve as an important organism for studies focused on microbial ecology and environmental biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. PAMC28705
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. PAMC28705 chromosome, complete genome.

Gene Summary

Adenine Count

892804 bp

Thymine Count

900106 bp

Guanine Count

1467365 bp

Cytosine Count

1467088 bp

Genome Length

4727363 bp

Protein-coding Genes

4279 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent epimerase/dehydratase family proteinE5769_RS15580Not AvailablePositive3398457 - 339937132358.1
sdr family nad(p)-dependent oxidoreductaseE5769_RS15585Not AvailablePositive3399368 - 340017728324.8
3-oxoacyl-acp reductaseE5769_RS15590Not AvailableNegative3400382 - 340130531297.2
abc transporter substrate-binding proteinE5769_RS15595Not AvailablePositive3401733 - 340330155247.4
rna-binding s4 domain-containing proteinE5769_RS15600Not AvailableNegative3403431 - 340380213501.4
carboxylating nicotinate-nucleotide diphosphorylaseE5769_RS15605Not AvailableNegative3403815 - 340468130102.9
l-aspartate oxidaseE5769_RS15610Not AvailableNegative3404684 - 340631855212.4
quinolinate synthase nadaE5769_RS15615Not AvailableNegative3406315 - 340736137320.4
nudix hydrolaseE5769_RS15620Not AvailablePositive3407513 - 340820825530.6
duf2567 domain-containing proteinE5769_RS15625Not AvailableNegative3408191 - 340882922148.7

Displaying genes 3141 – 3150 of 4340 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.