Rhodococcus sp. PAMC28705

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. PAMC28705 is a bacterial strain characterized by the presence of flagella, which may contribute to its motility and ecological interactions. It possesses a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation in its environment. The strain is cataloged under the accession number NZ_CP039254.1, which provides a reference for its genomic sequence and related research. Rhodococcus species are known for their versatile metabolic capabilities, particularly in the degradation of various organic compounds, including pollutants. Although specific metabolic traits of PAMC28705 are not detailed here, the presence of flagella suggests potential environmental adaptability, allowing the bacterium to explore diverse habitats and utilize available resources effectively. The ecological significance of Rhodococcus sp. PAMC28705 may lie in its role in bioremediation processes, particularly in environments contaminated with organic pollutants. Its motility, facilitated by flagella, could enhance its ability to colonize contaminated sites and contribute to the breakdown of harmful substances. Thus, Rhodococcus sp. PAMC28705 may serve as an important organism for studies focused on microbial ecology and environmental biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. PAMC28705
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. PAMC28705 chromosome, complete genome.

Gene Summary

Adenine Count

892804 bp

Thymine Count

900106 bp

Guanine Count

1467365 bp

Cytosine Count

1467088 bp

Genome Length

4727363 bp

Protein-coding Genes

4279 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
biphenyl-2,3-diol 1,2-dioxygenaseE5769_RS08245Not AvailablePositive1770884 - 177179233056.1
sdr family nad(p)-dependent oxidoreductaseE5769_RS08250Not AvailableNegative1771887 - 177267827975.5
hypothetical proteinE5769_RS08255Not AvailableNegative1772701 - 17729619157.63
rieske 2fe-2s domain-containing proteinE5769_RS08260Not AvailableNegative1772939 - 177410244077.3
3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9, 17-dione monooxygenase oxygenase subunitE5769_RS08265Not AvailablePositive1774300 - 177546642516.7
fad-dependent oxidoreductaseE5769_RS08270Not AvailableNegative1775467 - 177699353687.6
tetr family transcriptional regulatorE5769_RS08275Not AvailablePositive1777226 - 177783721927.7
steroid 3-ketoacyl-coa thiolaseE5769_RS08280Not AvailablePositive1777944 - 177911940386.1
acyl-coa dehydrogenaseE5769_RS08285Not AvailablePositive1779156 - 178134877707.5
maoc/paaz c-terminal domain-containing proteinE5769_RS08290Not AvailablePositive1781389 - 178226130950.8

Displaying genes 1661 – 1670 of 4340 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.