Rhodococcus sp. PAMC28707

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. PAMC28707 is characterized by the presence of flagella, indicating its motility, which is a significant trait for various ecological interactions and adaptations. This strain possesses a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and maintenance of genetic material. Its genomic data can be referenced under the accession number NZ_CP039253.1, which provides a basis for further studies into its genetic and biochemical properties. The motility conferred by flagella may play a crucial role in the ecological niches that Rhodococcus sp. PAMC28707 occupies, allowing it to navigate and respond to environmental stimuli effectively. This trait can be particularly advantageous in fluctuating habitats where the availability of nutrients or other resources may change. In summary, the combination of flagella presence and the single replicon structure in Rhodococcus sp. PAMC28707 suggests a potentially versatile organism capable of adapting to various environments, which may have implications for its role in biogeochemical cycles or bioremediation processes. Further research could elucidate the ecological significance of these traits in natural and engineered systems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. PAMC28707
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. PAMC28707 chromosome, complete genome.

Gene Summary

Adenine Count

900107 bp

Thymine Count

892804 bp

Guanine Count

1467089 bp

Cytosine Count

1467363 bp

Genome Length

4727363 bp

Protein-coding Genes

4286 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinE5720_RS03990Not AvailablePositive859089 - 85958617937.1
hypothetical proteinE5720_RS03995Not AvailableNegative859677 - 8598626436.41
wxg100 family type vii secretion targetE5720_RS04000Not AvailableNegative859999 - 86028910647.4
wxg100 family type vii secretion targetE5720_RS04005Not AvailableNegative860381 - 86068910747.7
type vii secretion-associated proteinE5720_RS04010Not AvailableNegative860855 - 86246856349.3
type vii secretion protein ecccaE5720_RS04015Not AvailableNegative862465 - 866463143442.0
llm class flavin-dependent oxidoreductaseE5720_RS04020Not AvailablePositive866707 - 86769635662.1
type vii secretion integral membrane protein eccdE5720_RS04025Not AvailablePositive867832 - 86934351473.0
type vii secretion-associated serine protease mycosinE5720_RS04030Not AvailablePositive869301 - 87078849671.8
type vii secretion protein eccbE5720_RS04035Not AvailableNegative870737 - 87218849872.6

Displaying genes 801 – 810 of 4347 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.