Rhodococcus sp. PAMC28707

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. PAMC28707 is characterized by the presence of flagella, indicating its motility, which is a significant trait for various ecological interactions and adaptations. This strain possesses a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and maintenance of genetic material. Its genomic data can be referenced under the accession number NZ_CP039253.1, which provides a basis for further studies into its genetic and biochemical properties. The motility conferred by flagella may play a crucial role in the ecological niches that Rhodococcus sp. PAMC28707 occupies, allowing it to navigate and respond to environmental stimuli effectively. This trait can be particularly advantageous in fluctuating habitats where the availability of nutrients or other resources may change. In summary, the combination of flagella presence and the single replicon structure in Rhodococcus sp. PAMC28707 suggests a potentially versatile organism capable of adapting to various environments, which may have implications for its role in biogeochemical cycles or bioremediation processes. Further research could elucidate the ecological significance of these traits in natural and engineered systems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. PAMC28707
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. PAMC28707 chromosome, complete genome.

Gene Summary

Adenine Count

900107 bp

Thymine Count

892804 bp

Guanine Count

1467089 bp

Cytosine Count

1467363 bp

Genome Length

4727363 bp

Protein-coding Genes

4286 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix transcriptional regulatorE5720_RS00150Not AvailableNegative41593 - 4258235516.0
pup--protein ligaseE5720_RS00155Not AvailableNegative42614 - 4397251286.0
phosphatase pap2 family proteinE5720_RS00160Not AvailablePositive44061 - 4553051190.1
proteasome subunit alphaE5720_RS00165Not AvailableNegative45555 - 4631027459.6
proteasome subunit betaE5720_RS00170Not AvailableNegative46307 - 4719430613.0
ubiquitin-like protein pupE5720_RS00175Not AvailableNegative47191 - 473857040.8
depupylase/deamidase dopE5720_RS00180Not AvailableNegative47771 - 4927054523.7
proteasome atpaseE5720_RS00185Not AvailableNegative49474 - 5124665395.6
trna (adenine-n1)-methyltransferaseE5720_RS00190Not AvailableNegative51641 - 5261834601.7
recb family exonucleaseE5720_RS00195Not AvailablePositive52770 - 5364232996.5

Displaying genes 31 – 40 of 4347 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.