Rhodococcus sp. PAMC28707

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. PAMC28707 is characterized by the presence of flagella, indicating its motility, which is a significant trait for various ecological interactions and adaptations. This strain possesses a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and maintenance of genetic material. Its genomic data can be referenced under the accession number NZ_CP039253.1, which provides a basis for further studies into its genetic and biochemical properties. The motility conferred by flagella may play a crucial role in the ecological niches that Rhodococcus sp. PAMC28707 occupies, allowing it to navigate and respond to environmental stimuli effectively. This trait can be particularly advantageous in fluctuating habitats where the availability of nutrients or other resources may change. In summary, the combination of flagella presence and the single replicon structure in Rhodococcus sp. PAMC28707 suggests a potentially versatile organism capable of adapting to various environments, which may have implications for its role in biogeochemical cycles or bioremediation processes. Further research could elucidate the ecological significance of these traits in natural and engineered systems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. PAMC28707
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. PAMC28707 chromosome, complete genome.

Gene Summary

Adenine Count

900107 bp

Thymine Count

892804 bp

Guanine Count

1467089 bp

Cytosine Count

1467363 bp

Genome Length

4727363 bp

Protein-coding Genes

4286 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbieE5720_RS00100Not AvailableNegative30910 - 3214243488.2
sdr family nad(p)-dependent oxidoreductaseE5720_RS00105Not AvailableNegative32121 - 3281324178.3
tigr03618 family f420-dependent ppox class oxidoreductaseE5720_RS00110Not AvailablePositive32926 - 3333914914.7
m24 family metallopeptidaseE5720_RS00115Not AvailableNegative33341 - 3448640071.6
5'-3' exonucleaseE5720_RS00120Not AvailablePositive34514 - 3548834112.8
duf4333 domain-containing proteinE5720_RS00125Not AvailableNegative35577 - 3641029757.9
dead/deah box helicaseE5720_RS00130Not AvailableNegative36457 - 3918099984.9
twin-arginine translocase subunit tatcE5720_RS00135Not AvailableNegative39190 - 4015235654.4
sec-independent protein translocase subunit tataE5720_RS00140Not AvailableNegative40221 - 405029778.69
helix-turn-helix transcriptional regulatorE5720_RS00145Not AvailableNegative40625 - 4159634773.3

Displaying genes 21 – 30 of 4347 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.