Rhodococcus sp. PAMC28707

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. PAMC28707 is characterized by the presence of flagella, indicating its motility, which is a significant trait for various ecological interactions and adaptations. This strain possesses a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and maintenance of genetic material. Its genomic data can be referenced under the accession number NZ_CP039253.1, which provides a basis for further studies into its genetic and biochemical properties. The motility conferred by flagella may play a crucial role in the ecological niches that Rhodococcus sp. PAMC28707 occupies, allowing it to navigate and respond to environmental stimuli effectively. This trait can be particularly advantageous in fluctuating habitats where the availability of nutrients or other resources may change. In summary, the combination of flagella presence and the single replicon structure in Rhodococcus sp. PAMC28707 suggests a potentially versatile organism capable of adapting to various environments, which may have implications for its role in biogeochemical cycles or bioremediation processes. Further research could elucidate the ecological significance of these traits in natural and engineered systems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. PAMC28707
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. PAMC28707 chromosome, complete genome.

Gene Summary

Adenine Count

900107 bp

Thymine Count

892804 bp

Guanine Count

1467089 bp

Cytosine Count

1467363 bp

Genome Length

4727363 bp

Protein-coding Genes

4286 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
demethylmenaquinone methyltransferaseE5720_RS14180Not AvailablePositive3088670 - 308930823038.5
geranylgeranyl reductase family proteinE5720_RS14185Not AvailableNegative3089314 - 309055843990.5
polyprenyl synthetase family proteinE5720_RS14190Not AvailablePositive3090733 - 309175235725.1
zinc metalloprotease htpxE5720_RS14195Not AvailablePositive3091826 - 309268630211.2
yajq family cyclic di-gmp-binding proteinE5720_RS14200Not AvailableNegative3092785 - 309328518300.7
Trna-tyrNot AvailableNot AvailablePositive3093441 - 3093523Not Available
Trna-thrNot AvailableNot AvailablePositive3093673 - 3093745Not Available
Trna-metNot AvailableNot AvailablePositive3093828 - 3093900Not Available
50s ribosomal protein l33E5720_RS14220Not AvailablePositive3093985 - 30941526484.78
(3r)-hydroxyacyl-acp dehydratase subunit hadaE5720_RS14225Not AvailablePositive3094310 - 309479517962.3

Displaying genes 2861 – 2870 of 4347 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.